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The map label for this gene is flgM [H]

Identifier: 138896701

GI number: 138896701

Start: 3159815

End: 3160081

Strand: Reverse

Name: flgM [H]

Synonym: GTNG_3064

Alternate gene names: 138896701

Gene position: 3160081-3159815 (Counterclockwise)

Preceding gene: 138896702

Following gene: 138896700

Centisome position: 89.01

GC content: 51.31

Gene sequence:

>267_bases
ATGAAAATCCACCATATTGGTCCGATGAACGTCAATCCGTATCAACGCCAACTGACCAAAACCGAGCGGTTAGCGGCAAG
GAAGGCGTCTGGAGACCAAGTGGAAATTTCGAAAGAAGCGAAGGAGCTGCAAGAAGCGGCAAGCTGGGAACAGGCGCGGC
AGGCGAAACTTGATGAGCTACGTCAACAAATCGAAAACGGTACGTATACGGTCGACCCGAAGGCGGTCGCGAAACGGATG
ATCGACTATTACCGAAATCACCGATAA

Upstream 100 bases:

>100_bases
AACAAGAAGATAAAAATAAAAAGAACTAAACATTTTCACCAACGTTCCGATATAAACGATAGCACGATATGAACAGCGCC
GGTCAAGCGAGGTGAACGCG

Downstream 100 bases:

>100_bases
AGGAAGCGGTTCGTGATGACATTTGCCGAACTCATTCATCTATTGCGGACACATGCCGAGCTGCATGAAAGCTTGTTAGT
GCTAGCGCGGCGGAAAACGG

Product: anti-sigma factor repressor of sigma-D-dependent transcription

Products: NA

Alternate protein names: Anti-sigma-D factor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKIHHIGPMNVNPYQRQLTKTERLAARKASGDQVEISKEAKELQEAASWEQARQAKLDELRQQIENGTYTVDPKAVAKRM
IDYYRNHR

Sequences:

>Translated_88_residues
MKIHHIGPMNVNPYQRQLTKTERLAARKASGDQVEISKEAKELQEAASWEQARQAKLDELRQQIENGTYTVDPKAVAKRM
IDYYRNHR
>Mature_88_residues
MKIHHIGPMNVNPYQRQLTKTERLAARKASGDQVEISKEAKELQEAASWEQARQAKLDELRQQIENGTYTVDPKAVAKRM
IDYYRNHR

Specific function: Allows the coupling of early and late flagellar synthesis through the repression of RNA polymerase sigma-D factor- dependent transcription [H]

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007412 [H]

Pfam domain/function: PF04316 FlgM [H]

EC number: NA

Molecular weight: Translated: 10279; Mature: 10279

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHHIGPMNVNPYQRQLTKTERLAARKASGDQVEISKEAKELQEAASWEQARQAKLDEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQIENGTYTVDPKAVAKRMIDYYRNHR
HHHHHCCCEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIHHIGPMNVNPYQRQLTKTERLAARKASGDQVEISKEAKELQEAASWEQARQAKLDEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQIENGTYTVDPKAVAKRMIDYYRNHR
HHHHHCCCEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]