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The map label for this gene is bioY [H]

Identifier: 138896533

GI number: 138896533

Start: 3003348

End: 3003956

Strand: Direct

Name: bioY [H]

Synonym: GTNG_2896

Alternate gene names: 138896533

Gene position: 3003348-3003956 (Clockwise)

Preceding gene: 138896531

Following gene: 138896537

Centisome position: 84.59

GC content: 57.31

Gene sequence:

>609_bases
ATGGACGGACAACAGACTTCCCTTCGCCCGCTCGATATGACGCTCGCCGCCATGTTCGTCGCCTTGATGGCAATCGGTGC
AAACATCACGTCATGGGTGCCGTTTCTTGTTGTCGGCGGCGTGCCGATCACGTTGCAAACGTTCTTTTGCGTGCTTGCCG
GTGCCGTATTAGGGCGGCGGCTCGGTGCGGTCGCAATGACTGTGTATATGCTCGTCGGCCTTGCGGGCGTACCGGTGTTC
GCCGGCCTCAACGGCGGATTATCGATGATGTTCAAACCGACATTTGGCTTTATTCTTTCATTTATCGCCTCCGCTTATGC
GACCGGTTGGATCATCAATCGCGGCCCGCAGCCGGCGTCAACCGCCCGCTTTATCACCGCAGCGCTCATCGGCATGGTGA
TCAACTATGTCATCGGCACGAACTGGATGTATATGGCGTATCAATTATGGGCCGAAGCACCGGAAGGGTTGTCGTATCAA
ATGGTGTGGGGGTGGATGCTCGCTCCGCTGCCGAAAGATATTGTGTTATCAGTCGTCGCCGGTTTGATCGCCCCACGTCT
TTGTCGGGCGATTGGCCGATCCGTTTCCGCAAGCCGGCCCGCCGCATAA

Upstream 100 bases:

>100_bases
CCCCGCGGCGAATCACATCATCCGTCGAAAAAAGAGGATTGACAGTCAACCGTTTGTTCGATATGATTTTGTTAACTTAA
AAACAAAAGGAGGTTTACAT

Downstream 100 bases:

>100_bases
AAAAACGCGCCTGTTTATAGCAGGCGCATCTCTCGTTAGAAAAACAAATTGAACACTTGGTATAGAAAAGCAGCAATTAA
CGCCGAAATCGGCAATGTGA

Product: biotin synthesis proein BioY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDGQQTSLRPLDMTLAAMFVALMAIGANITSWVPFLVVGGVPITLQTFFCVLAGAVLGRRLGAVAMTVYMLVGLAGVPVF
AGLNGGLSMMFKPTFGFILSFIASAYATGWIINRGPQPASTARFITAALIGMVINYVIGTNWMYMAYQLWAEAPEGLSYQ
MVWGWMLAPLPKDIVLSVVAGLIAPRLCRAIGRSVSASRPAA

Sequences:

>Translated_202_residues
MDGQQTSLRPLDMTLAAMFVALMAIGANITSWVPFLVVGGVPITLQTFFCVLAGAVLGRRLGAVAMTVYMLVGLAGVPVF
AGLNGGLSMMFKPTFGFILSFIASAYATGWIINRGPQPASTARFITAALIGMVINYVIGTNWMYMAYQLWAEAPEGLSYQ
MVWGWMLAPLPKDIVLSVVAGLIAPRLCRAIGRSVSASRPAA
>Mature_202_residues
MDGQQTSLRPLDMTLAAMFVALMAIGANITSWVPFLVVGGVPITLQTFFCVLAGAVLGRRLGAVAMTVYMLVGLAGVPVF
AGLNGGLSMMFKPTFGFILSFIASAYATGWIINRGPQPASTARFITAALIGMVINYVIGTNWMYMAYQLWAEAPEGLSYQ
MVWGWMLAPLPKDIVLSVVAGLIAPRLCRAIGRSVSASRPAA

Specific function: Putative biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 21484; Mature: 21484

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGQQTSLRPLDMTLAAMFVALMAIGANITSWVPFLVVGGVPITLQTFFCVLAGAVLGRR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGAVAMTVYMLVGLAGVPVFAGLNGGLSMMFKPTFGFILSFIASAYATGWIINRGPQPAS
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHEECHHHHHHHHHHHHHHHHCCCEECCCCCHH
TARFITAALIGMVINYVIGTNWMYMAYQLWAEAPEGLSYQMVWGWMLAPLPKDIVLSVVA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
GLIAPRLCRAIGRSVSASRPAA
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDGQQTSLRPLDMTLAAMFVALMAIGANITSWVPFLVVGGVPITLQTFFCVLAGAVLGRR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGAVAMTVYMLVGLAGVPVFAGLNGGLSMMFKPTFGFILSFIASAYATGWIINRGPQPAS
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHEECHHHHHHHHHHHHHHHHCCCEECCCCCHH
TARFITAALIGMVINYVIGTNWMYMAYQLWAEAPEGLSYQMVWGWMLAPLPKDIVLSVVA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
GLIAPRLCRAIGRSVSASRPAA
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]