| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896452
Identifier: 138896452
GI number: 138896452
Start: 2934091
End: 2935236
Strand: Reverse
Name: 138896452
Synonym: GTNG_2815
Alternate gene names: NA
Gene position: 2935236-2934091 (Counterclockwise)
Preceding gene: 138896453
Following gene: 138896451
Centisome position: 82.68
GC content: 51.83
Gene sequence:
>1146_bases ATGGCGAAACCGGTCGTTGAAGTGGCCATTACTGGCATAGATGAAGTGTCCGGCATTTTGAATCACGTCACTCGAAATGC AGAAAAGGCGTTCAACGCTGTAGAAAGTGCCATCAGATCGGTGCCAGATTTAAACATTCAGGCCGATACGTCTCCTGTTG TCCGGCTAGAAGGAACGATTCGAGAACTCTCTCAGACTATCCGTTCCATGCCCTCCCCGACAGTGGATACATCGAAAGCA AGGGGCGAATTGAAGAAACTAAAAGACGAAGCGGAGAGTACGAAGAAATCACTGAAAGACATCGACTTTGAGCCTGTTCT GTCCGGTATGGCGACAGGGGCAGGCATTTCAGCGGTCGTCGGGAAAGCGTTAGAGAGCGTAAACACGGAGACAAAAATCC GTGTTTCATTCGACGTTCCACCAGAGTCCATTAAGACGGTCAGGGACGCGACAAATACGGTCAAAGCGTATGGGATTGAC GCCGAAAGCGCCTTGGAAGGTGTTCGGCGTCAATTTGCTTTAAACGCAGACGCGAGTGACGCTGCCAACCGGAAGATCGT TGAGGGAGCCGGAGCGATTGCGGCTGCCTATTCAGGAGTTGACTTCACGGAGCTTATTCAGGAAGTCAATGAAATTGGCA GCGAGCTTGAAATATCGGATCAGCAAGCGCTCGAACTCGTCAACTCCTTGTTACGTGTTGGATTCCCGCCCGAGCAGTTG GACATCATTTCCGAGTACGGGCAACAGTTGCAACGAGCCGGTTTTGACGCCAAAGAAATTCAAGCGATTTTCGCGGCTGG CGTGGAGACCGGAACTTGGAACATAGATAACCTCTTGGATGGCCTCAAGGAGGGGCGTATCCGTCTTGCCGAGTTTGGCC AGGGTATCGATGACTCAATGAAGGAACTGTTGCAGGGAACAGGCATTTCAGCCAAGCAGTTACAAACGTGGGGACAGGCT GTTGCGGCCGGCGGTGACAAAGGAAAGCAGGCCATGCAACAGGTCGCCAAAGCGTTGATGAACGTCAAAGACGAGACAAA GCGCAACGCCTTGGGAGTCGCGATTTTCGGTAAACGAAGACTGTGCCGAAGTAAAACCGGGCAAAGTCGGTGGAGGCTAG AGCCACCTTTTAGGAAGGTATGCTAA
Upstream 100 bases:
>100_bases CGCGCATCATAACAAGATTCAAAAAGAGTGCCAAAAAGAAATCGAGAAGCTGCGCGGAAAGCTCCCTAAGCGCGCGCGTT TACGAAAGGGGAGGTGACGC
Downstream 100 bases:
>100_bases CACCGAGGTAACAGGGAACACCACCCTGCACCGTAGAGCGTAGGCGGTGAGCGTTAAGGGAGCAATAATCCGCCCAAGAG TGTCCGGCAACCTTTTGAGG
Product: prophage LambdaBa04, tape measure protein
Products: NA
Alternate protein names: TMP Repeat Protein; Phage Protein; TMP Repeat-Containing Protein; Phage Tail Tape Measure Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAKPVVEVAITGIDEVSGILNHVTRNAEKAFNAVESAIRSVPDLNIQADTSPVVRLEGTIRELSQTIRSMPSPTVDTSKA RGELKKLKDEAESTKKSLKDIDFEPVLSGMATGAGISAVVGKALESVNTETKIRVSFDVPPESIKTVRDATNTVKAYGID AESALEGVRRQFALNADASDAANRKIVEGAGAIAAAYSGVDFTELIQEVNEIGSELEISDQQALELVNSLLRVGFPPEQL DIISEYGQQLQRAGFDAKEIQAIFAAGVETGTWNIDNLLDGLKEGRIRLAEFGQGIDDSMKELLQGTGISAKQLQTWGQA VAAGGDKGKQAMQQVAKALMNVKDETKRNALGVAIFGKRRLCRSKTGQSRWRLEPPFRKVC
Sequences:
>Translated_381_residues MAKPVVEVAITGIDEVSGILNHVTRNAEKAFNAVESAIRSVPDLNIQADTSPVVRLEGTIRELSQTIRSMPSPTVDTSKA RGELKKLKDEAESTKKSLKDIDFEPVLSGMATGAGISAVVGKALESVNTETKIRVSFDVPPESIKTVRDATNTVKAYGID AESALEGVRRQFALNADASDAANRKIVEGAGAIAAAYSGVDFTELIQEVNEIGSELEISDQQALELVNSLLRVGFPPEQL DIISEYGQQLQRAGFDAKEIQAIFAAGVETGTWNIDNLLDGLKEGRIRLAEFGQGIDDSMKELLQGTGISAKQLQTWGQA VAAGGDKGKQAMQQVAKALMNVKDETKRNALGVAIFGKRRLCRSKTGQSRWRLEPPFRKVC >Mature_380_residues AKPVVEVAITGIDEVSGILNHVTRNAEKAFNAVESAIRSVPDLNIQADTSPVVRLEGTIRELSQTIRSMPSPTVDTSKAR GELKKLKDEAESTKKSLKDIDFEPVLSGMATGAGISAVVGKALESVNTETKIRVSFDVPPESIKTVRDATNTVKAYGIDA ESALEGVRRQFALNADASDAANRKIVEGAGAIAAAYSGVDFTELIQEVNEIGSELEISDQQALELVNSLLRVGFPPEQLD IISEYGQQLQRAGFDAKEIQAIFAAGVETGTWNIDNLLDGLKEGRIRLAEFGQGIDDSMKELLQGTGISAKQLQTWGQAV AAGGDKGKQAMQQVAKALMNVKDETKRNALGVAIFGKRRLCRSKTGQSRWRLEPPFRKVC
Specific function: Unknown
COG id: COG5280
COG function: function code S; Phage-related minor tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41025; Mature: 40894
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPVVEVAITGIDEVSGILNHVTRNAEKAFNAVESAIRSVPDLNIQADTSPVVRLEGTI CCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEHHHH RELSQTIRSMPSPTVDTSKARGELKKLKDEAESTKKSLKDIDFEPVLSGMATGAGISAVV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH GKALESVNTETKIRVSFDVPPESIKTVRDATNTVKAYGIDAESALEGVRRQFALNADASD HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH AANRKIVEGAGAIAAAYSGVDFTELIQEVNEIGSELEISDQQALELVNSLLRVGFPPEQL HHCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHH DIISEYGQQLQRAGFDAKEIQAIFAAGVETGTWNIDNLLDGLKEGRIRLAEFGQGIDDSM HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEHHHHCCCCCHHH KELLQGTGISAKQLQTWGQAVAAGGDKGKQAMQQVAKALMNVKDETKRNALGVAIFGKRR HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCEEEEHHHHH LCRSKTGQSRWRLEPPFRKVC HHHCCCCCCCCCCCCCHHHCC >Mature Secondary Structure AKPVVEVAITGIDEVSGILNHVTRNAEKAFNAVESAIRSVPDLNIQADTSPVVRLEGTI CCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEHHHH RELSQTIRSMPSPTVDTSKARGELKKLKDEAESTKKSLKDIDFEPVLSGMATGAGISAVV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH GKALESVNTETKIRVSFDVPPESIKTVRDATNTVKAYGIDAESALEGVRRQFALNADASD HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH AANRKIVEGAGAIAAAYSGVDFTELIQEVNEIGSELEISDQQALELVNSLLRVGFPPEQL HHCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHH DIISEYGQQLQRAGFDAKEIQAIFAAGVETGTWNIDNLLDGLKEGRIRLAEFGQGIDDSM HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEHHHHCCCCCHHH KELLQGTGISAKQLQTWGQAVAAGGDKGKQAMQQVAKALMNVKDETKRNALGVAIFGKRR HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCEEEEHHHHH LCRSKTGQSRWRLEPPFRKVC HHHCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA