| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896451
Identifier: 138896451
GI number: 138896451
Start: 2932316
End: 2933878
Strand: Reverse
Name: 138896451
Synonym: GTNG_2814
Alternate gene names: NA
Gene position: 2933878-2932316 (Counterclockwise)
Preceding gene: 138896452
Following gene: 138896450
Centisome position: 82.64
GC content: 50.8
Gene sequence:
>1563_bases ATGTGGGAAGACCAAGGCGACAACATTGCAGAAACGCTCCTGAACATGAACAAGCACTTGGGTGACGCGAACAAGAACCA AGGCTTGTTCAATCAGACCGTGCAACAGATGCAGGCTGATCCGATGTTCCAAATGCAAAAGGCGTTTAACGATTTAAACA CAGCCCTAGCTCCGGTGTATCGGGGAATTGCTGATGTGGTTAGCAAAGTGGCCGAGTGGATTTCTAATAACCCGAAACTG GCGGCAACCATCGCGGCGATTGTCACGGTGATTGGCATTATCACCGGATTATTTTTGACGCTCGCCCCGATTGTGTCTAC CATCGCTACGGCGATGGGAGTTCTTGGCGTCAGTTTTGGGGCGATTGCGGCGCCGGTGTTGATTGTAATAGGCGTTATAG GAGCACTCATCGCGATCATCATTTTGCTATGGAAGAACTGGGATTCGGTCAGTAAGTTTCTGTCGAACTCGTGGAACGCG ATCAAAAGCGTGGCGCAAACCGTGTTCAGCGCACTTGGAGCGTTCTTCGTGAGTGTATGGGAAGGCATCAAGAGCGTATC CATCACGGTCTGGAATGCTATCAAGTCCGCGTTGTCAACGGCGTGGAGCACGATTAAATCTGTGGCTTCTACCGTTTTTG ACGCAATTAAAACAGCGATCTCGAACATTTGGAACACGATTAAAAGCGTGACATCGACCGTCTGGAACGCTATCAAGTCG GCGTTGACGGCAACGTGGAACGGCATTAAAAGCGCCGTATCGACAGTATTCAGCGCGATCCAGACGGTGATTTCGACCGT GTGGAACGTCATTCGTACCATGACGACAACGGTCTGGAATGCCATCCGTTCGGCTTTGACTACTGCATGGAACGCGATTA AATCTGCGGTTTCTTCTGTTTTCAATGCAATTCGGAACGTGATTTCAACAGTCTGGAACGCCATCCGTTCTGTCACGTCG AGCGTGTGGAATGGTATCAAAAGTGCAATCAGTTCTGTTATCAACGGCATTCGTTCGGGAATTTCAAGCACGTTCAGCAG CATTCGCAGTATCATTTCAAGCGTATGGAATGGAGTGAAAAGCGCGACATCGAGCGCATGGAACAGCGTGGTTAGCTCAG TACGTGGCGCAGTAAACAAAGTCATTGGCTTTATCAACCGCATGATTAACTCGATCAACAGCGTTCGCATTCCGATTCCG AAGATTCCCGACTGGGTTCCGGTGATTGGGGGACGCGGCGGCGGCTCGATTGGGTTCAATATACCGAACATTCCACGTTT GGCAACAGGTGGTGTAGTTGACGAGCCGACGCTAGCGATTGTCGGTGACGCCGGAGCAGGAAACCCCGAGATTGTGGCAC CGCAACGAATGTTGCGAAGCATCATCCGTGAAGAACTGCAAAACAGCGGAGCACAAGGAGCAGAGCAAATACAAGTTGTC GTTCCTGTCATCTTGGACGGCAGGGAAATTATGCGAGTGGTCACGCCTTATATCGACCGTGAACTCGGTCAACGGCGCAT CGGAAAAATGAGGGCAAACGGCATAGGAGGGAGCGTCTTGTGA
Upstream 100 bases:
>100_bases GCCGAACCGGGCTGGAATTGACCAGCCGTATCCCGTGACAGGGTATGAGGGAAACCTCCGGAAGCAAAGGATAAAAAGCC TTTGCGATAACAAATTGACC
Downstream 100 bases:
>100_bases TTACGTATGACGGGTTTGACCTTTCACCATATCTACTCGTTCGGGACATTGGACGCCCCTTAATGCCGCCGCAAGAAATC GCATCCATGTCTATCGCCGG
Product: prophage LambdaBa01, membrane protein
Products: NA
Alternate protein names: Phage Protein; Prophage; Phage-Related Protein-Like Protein; Tail Tape Measure Protein; TMP Repeat-Containing Protein; Tail Length Tape Measure Protein; Phage-Related Tail Protein; TMP Repeat Family; Phage Tail Tape Measure Protein TP; TMP Repeat Protein; Phage Tape Measure Protein; Phage Related Protein Minor Tail Protein; Phage Related Protein; Phage Tail Length Tape-Measure Protein; Endoglucanase Y; Tail Protein; Prophage Membrane Protein; Phage-Related Minor Tail Protein; Mu-Like Phage Minor Tail Protein; Phage-Like Protein; Prophage Lp2 Protein
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MWEDQGDNIAETLLNMNKHLGDANKNQGLFNQTVQQMQADPMFQMQKAFNDLNTALAPVYRGIADVVSKVAEWISNNPKL AATIAAIVTVIGIITGLFLTLAPIVSTIATAMGVLGVSFGAIAAPVLIVIGVIGALIAIIILLWKNWDSVSKFLSNSWNA IKSVAQTVFSALGAFFVSVWEGIKSVSITVWNAIKSALSTAWSTIKSVASTVFDAIKTAISNIWNTIKSVTSTVWNAIKS ALTATWNGIKSAVSTVFSAIQTVISTVWNVIRTMTTTVWNAIRSALTTAWNAIKSAVSSVFNAIRNVISTVWNAIRSVTS SVWNGIKSAISSVINGIRSGISSTFSSIRSIISSVWNGVKSATSSAWNSVVSSVRGAVNKVIGFINRMINSINSVRIPIP KIPDWVPVIGGRGGGSIGFNIPNIPRLATGGVVDEPTLAIVGDAGAGNPEIVAPQRMLRSIIREELQNSGAQGAEQIQVV VPVILDGREIMRVVTPYIDRELGQRRIGKMRANGIGGSVL
Sequences:
>Translated_520_residues MWEDQGDNIAETLLNMNKHLGDANKNQGLFNQTVQQMQADPMFQMQKAFNDLNTALAPVYRGIADVVSKVAEWISNNPKL AATIAAIVTVIGIITGLFLTLAPIVSTIATAMGVLGVSFGAIAAPVLIVIGVIGALIAIIILLWKNWDSVSKFLSNSWNA IKSVAQTVFSALGAFFVSVWEGIKSVSITVWNAIKSALSTAWSTIKSVASTVFDAIKTAISNIWNTIKSVTSTVWNAIKS ALTATWNGIKSAVSTVFSAIQTVISTVWNVIRTMTTTVWNAIRSALTTAWNAIKSAVSSVFNAIRNVISTVWNAIRSVTS SVWNGIKSAISSVINGIRSGISSTFSSIRSIISSVWNGVKSATSSAWNSVVSSVRGAVNKVIGFINRMINSINSVRIPIP KIPDWVPVIGGRGGGSIGFNIPNIPRLATGGVVDEPTLAIVGDAGAGNPEIVAPQRMLRSIIREELQNSGAQGAEQIQVV VPVILDGREIMRVVTPYIDRELGQRRIGKMRANGIGGSVL >Mature_520_residues MWEDQGDNIAETLLNMNKHLGDANKNQGLFNQTVQQMQADPMFQMQKAFNDLNTALAPVYRGIADVVSKVAEWISNNPKL AATIAAIVTVIGIITGLFLTLAPIVSTIATAMGVLGVSFGAIAAPVLIVIGVIGALIAIIILLWKNWDSVSKFLSNSWNA IKSVAQTVFSALGAFFVSVWEGIKSVSITVWNAIKSALSTAWSTIKSVASTVFDAIKTAISNIWNTIKSVTSTVWNAIKS ALTATWNGIKSAVSTVFSAIQTVISTVWNVIRTMTTTVWNAIRSALTTAWNAIKSAVSSVFNAIRNVISTVWNAIRSVTS SVWNGIKSAISSVINGIRSGISSTFSSIRSIISSVWNGVKSATSSAWNSVVSSVRGAVNKVIGFINRMINSINSVRIPIP KIPDWVPVIGGRGGGSIGFNIPNIPRLATGGVVDEPTLAIVGDAGAGNPEIVAPQRMLRSIIREELQNSGAQGAEQIQVV VPVILDGREIMRVVTPYIDRELGQRRIGKMRANGIGGSVL
Specific function: Unknown
COG id: COG5412
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55325; Mature: 55325
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEDQGDNIAETLLNMNKHLGDANKNQGLFNQTVQQMQADPMFQMQKAFNDLNTALAPVY CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RGIADVVSKVAEWISNNPKLAATIAAIVTVIGIITGLFLTLAPIVSTIATAMGVLGVSFG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIAAPVLIVIGVIGALIAIIILLWKNWDSVSKFLSNSWNAIKSVAQTVFSALGAFFVSVW HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EGIKSVSITVWNAIKSALSTAWSTIKSVASTVFDAIKTAISNIWNTIKSVTSTVWNAIKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTATWNGIKSAVSTVFSAIQTVISTVWNVIRTMTTTVWNAIRSALTTAWNAIKSAVSSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNAIRNVISTVWNAIRSVTSSVWNGIKSAISSVINGIRSGISSTFSSIRSIISSVWNGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATSSAWNSVVSSVRGAVNKVIGFINRMINSINSVRIPIPKIPDWVPVIGGRGGGSIGFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC IPNIPRLATGGVVDEPTLAIVGDAGAGNPEIVAPQRMLRSIIREELQNSGAQGAEQIQVV CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH VPVILDGREIMRVVTPYIDRELGQRRIGKMRANGIGGSVL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MWEDQGDNIAETLLNMNKHLGDANKNQGLFNQTVQQMQADPMFQMQKAFNDLNTALAPVY CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RGIADVVSKVAEWISNNPKLAATIAAIVTVIGIITGLFLTLAPIVSTIATAMGVLGVSFG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIAAPVLIVIGVIGALIAIIILLWKNWDSVSKFLSNSWNAIKSVAQTVFSALGAFFVSVW HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EGIKSVSITVWNAIKSALSTAWSTIKSVASTVFDAIKTAISNIWNTIKSVTSTVWNAIKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTATWNGIKSAVSTVFSAIQTVISTVWNVIRTMTTTVWNAIRSALTTAWNAIKSAVSSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNAIRNVISTVWNAIRSVTSSVWNGIKSAISSVINGIRSGISSTFSSIRSIISSVWNGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATSSAWNSVVSSVRGAVNKVIGFINRMINSINSVRIPIPKIPDWVPVIGGRGGGSIGFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC IPNIPRLATGGVVDEPTLAIVGDAGAGNPEIVAPQRMLRSIIREELQNSGAQGAEQIQVV CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH VPVILDGREIMRVVTPYIDRELGQRRIGKMRANGIGGSVL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA