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The map label for this gene is yrdA [H]

Identifier: 138896435

GI number: 138896435

Start: 2913957

End: 2914487

Strand: Direct

Name: yrdA [H]

Synonym: GTNG_2798

Alternate gene names: 138896435

Gene position: 2913957-2914487 (Clockwise)

Preceding gene: 138896432

Following gene: 138896436

Centisome position: 82.08

GC content: 41.62

Gene sequence:

>531_bases
ATGATCCATGGTTTGGAGGTATTGTATATGTATGTCACAGTCGCAGATTTCATTAGGGAATGGAATTGGGAAGCAAGCCT
AACTCAAAAGGTTTTGGATGGTTTGACCGATGAAGCGTTAAACCAAAAAGTTTACCCAGAAGGTCGTACGTTAGGAAGGA
TTGTGTGGCATTTTACAACAAACATCCCGGAATATTTAGCCCATTTCGGGTTGAAGATCGATAAAGTAGAAAATGCAGAA
AACGTTCCAACTTCAGCCAAAGAAATAGCAGAAACCTTTCAAAAGGTAAGTTCCTATGCGGCCAAAGTCATTGAACAACA
ATGGACAGACGAATCGTTGAAGGAAGTGCAAAATGCATTCGGAAGGCAAGAAACCAATGCTCAAATCTTAATGGGGCTAA
TCAAGCACATCATTCATCATCGTGGCCAAGTGACTGTTCTTATGCGTCAAGCGGGACTCAAACCTTTTGGAGTTTATGGT
CCATCCAAAGAAGATTGGGTTCATTTCGGTGTGGACAATCCACCGCTTTAA

Upstream 100 bases:

>100_bases
CCCAATAAGGCTACAAAAGTAAAGTGTTTTGTGACTCGTTCAAGTCAATCGACAACCGCTCCCATACAGATAAAAAACGA
GTATTGCTATGAGGAAATAC

Downstream 100 bases:

>100_bases
TCATCATGGTCTAACGGGTGCATTCGTTGAAAAGAAAAGGGAAACCCTGATTGGGTTTCCCTTCATTTTATCGTTCCCAC
AGGCAGGAAAATGTTCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIHGLEVLYMYVTVADFIREWNWEASLTQKVLDGLTDEALNQKVYPEGRTLGRIVWHFTTNIPEYLAHFGLKIDKVENAE
NVPTSAKEIAETFQKVSSYAAKVIEQQWTDESLKEVQNAFGRQETNAQILMGLIKHIIHHRGQVTVLMRQAGLKPFGVYG
PSKEDWVHFGVDNPPL

Sequences:

>Translated_176_residues
MIHGLEVLYMYVTVADFIREWNWEASLTQKVLDGLTDEALNQKVYPEGRTLGRIVWHFTTNIPEYLAHFGLKIDKVENAE
NVPTSAKEIAETFQKVSSYAAKVIEQQWTDESLKEVQNAFGRQETNAQILMGLIKHIIHHRGQVTVLMRQAGLKPFGVYG
PSKEDWVHFGVDNPPL
>Mature_176_residues
MIHGLEVLYMYVTVADFIREWNWEASLTQKVLDGLTDEALNQKVYPEGRTLGRIVWHFTTNIPEYLAHFGLKIDKVENAE
NVPTSAKEIAETFQKVSSYAAKVIEQQWTDESLKEVQNAFGRQETNAQILMGLIKHIIHHRGQVTVLMRQAGLKPFGVYG
PSKEDWVHFGVDNPPL

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 20107; Mature: 20107

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHGLEVLYMYVTVADFIREWNWEASLTQKVLDGLTDEALNQKVYPEGRTLGRIVWHFTT
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
NIPEYLAHFGLKIDKVENAENVPTSAKEIAETFQKVSSYAAKVIEQQWTDESLKEVQNAF
CHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GRQETNAQILMGLIKHIIHHRGQVTVLMRQAGLKPFGVYGPSKEDWVHFGVDNPPL
CCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MIHGLEVLYMYVTVADFIREWNWEASLTQKVLDGLTDEALNQKVYPEGRTLGRIVWHFTT
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
NIPEYLAHFGLKIDKVENAENVPTSAKEIAETFQKVSSYAAKVIEQQWTDESLKEVQNAF
CHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GRQETNAQILMGLIKHIIHHRGQVTVLMRQAGLKPFGVYGPSKEDWVHFGVDNPPL
CCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]