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The map label for this gene is 138896426

Identifier: 138896426

GI number: 138896426

Start: 2906938

End: 2907564

Strand: Direct

Name: 138896426

Synonym: GTNG_2789

Alternate gene names: NA

Gene position: 2906938-2907564 (Clockwise)

Preceding gene: 138896423

Following gene: 138896427

Centisome position: 81.88

GC content: 51.83

Gene sequence:

>627_bases
ATGAAAGAACATATTGCTGCTGTGCACAAACAAACGATTGCCCAAGCCGCTGAGCGGCTGTTTCTCGAACGCGGGTTTGA
CGGCACGTCAATCAGCGACATTTGCGCAGCGTCGGGATATAGCCGCCGCACGGTGTACCGCTACTTTGACACAAAGGAGG
AGATTTTGTACTACATCGTCGCGAATGGTCTCGAACAGTTGCGTGATCGTCTAACCGACATCGTGCAAGCCGAGCAGCCG
TTTTTGGCTAAGTACGAACACATTTGTAAAGCGATGCGCGCTTACTACGAACATTGTCCCGTTTCGGCACGCGCCGTCCA
TCAGTTTCAACCGAAAGCGCTTGAGACAGTAACGCCAACCATGGAAACCATTTTCTCTTTAGGAACGGCCATCAATGACG
CCCTCGCCCGCTGGATTGAGCAAGGCATCGCAGAAGGCGTTGTCCGCGAAACGGCGGACGTCATGATGACCGTGTACGTG
TTTTCTGCACAACTACATGCGCTGTTTGACCTTGTCGAAACAAAAGGAGCGTTTTTGCTGCCGACACTCGGCAAGACGAA
AGAGCAGTTTTTCGCCTACGGCCAGAAGATGATTTTCAATAGTCTCGCAAAGGAGCCATTGCGATGA

Upstream 100 bases:

>100_bases
CATTGTTTGGATGGCTCGTTTGTCAATAAGGCAACCACTTGACGAACAGAAAAACAAAAAGTATACTCATAGTATACTTT
TGATACTAGGGGTATCCACT

Downstream 100 bases:

>100_bases
AACCAAATGAACCGAGCATGACCGCATTGATGTCCTGTTTCGTCCGCGCCTATCATACGGAACACGACACGCCTGTCATT
TTTCGTGACGATATGGCCAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKEHIAAVHKQTIAQAAERLFLERGFDGTSISDICAASGYSRRTVYRYFDTKEEILYYIVANGLEQLRDRLTDIVQAEQP
FLAKYEHICKAMRAYYEHCPVSARAVHQFQPKALETVTPTMETIFSLGTAINDALARWIEQGIAEGVVRETADVMMTVYV
FSAQLHALFDLVETKGAFLLPTLGKTKEQFFAYGQKMIFNSLAKEPLR

Sequences:

>Translated_208_residues
MKEHIAAVHKQTIAQAAERLFLERGFDGTSISDICAASGYSRRTVYRYFDTKEEILYYIVANGLEQLRDRLTDIVQAEQP
FLAKYEHICKAMRAYYEHCPVSARAVHQFQPKALETVTPTMETIFSLGTAINDALARWIEQGIAEGVVRETADVMMTVYV
FSAQLHALFDLVETKGAFLLPTLGKTKEQFFAYGQKMIFNSLAKEPLR
>Mature_208_residues
MKEHIAAVHKQTIAQAAERLFLERGFDGTSISDICAASGYSRRTVYRYFDTKEEILYYIVANGLEQLRDRLTDIVQAEQP
FLAKYEHICKAMRAYYEHCPVSARAVHQFQPKALETVTPTMETIFSLGTAINDALARWIEQGIAEGVVRETADVMMTVYV
FSAQLHALFDLVETKGAFLLPTLGKTKEQFFAYGQKMIFNSLAKEPLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23613; Mature: 23613

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEHIAAVHKQTIAQAAERLFLERGFDGTSISDICAASGYSRRTVYRYFDTKEEILYYIV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH
ANGLEQLRDRLTDIVQAEQPFLAKYEHICKAMRAYYEHCPVSARAVHQFQPKALETVTPT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
METIFSLGTAINDALARWIEQGIAEGVVRETADVMMTVYVFSAQLHALFDLVETKGAFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
PTLGKTKEQFFAYGQKMIFNSLAKEPLR
CCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEHIAAVHKQTIAQAAERLFLERGFDGTSISDICAASGYSRRTVYRYFDTKEEILYYIV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH
ANGLEQLRDRLTDIVQAEQPFLAKYEHICKAMRAYYEHCPVSARAVHQFQPKALETVTPT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
METIFSLGTAINDALARWIEQGIAEGVVRETADVMMTVYVFSAQLHALFDLVETKGAFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
PTLGKTKEQFFAYGQKMIFNSLAKEPLR
CCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA