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The map label for this gene is yktD [H]

Identifier: 138896427

GI number: 138896427

Start: 2907561

End: 2908463

Strand: Direct

Name: yktD [H]

Synonym: GTNG_2790

Alternate gene names: 138896427

Gene position: 2907561-2908463 (Clockwise)

Preceding gene: 138896426

Following gene: 138896430

Centisome position: 81.9

GC content: 51.16

Gene sequence:

>903_bases
ATGAAACCAAATGAACCGAGCATGACCGCATTGATGTCCTGTTTCGTCCGCGCCTATCATACGGAACACGACACGCCTGT
CATTTTTCGTGACGATATGGCCAGACAGCTGATCACAGACGAAGAATACAAACAAATCCAAACCTTTCTCGCCAACGGCT
TGGGATTTTTTGCCCCCGAGCGGCTTGATGCGTTCTCATCGGACGAAGAGAAAGTGAAATGGATCGTCCAAACGCAGCTC
GCTCCGACTCCAATCGCTCGCGCTGCCTATACCGAACGGATCATCCACCACGAAAAGCGACTTGGCGCGACGCAATATGT
CATTTTAGGAGCAGGGCTGGATACGTTCGCCTTCCGCCATCCAAACAGCGGCCTGACGATATTCGAAGTCGACCACCCCA
ACACGCAGCAATTCAAGCGCGAACGCATCCACATGGCCAACTGGAAGATGCCGAACTGCTTGCAACTGGTCGCCGCTGAT
TTTACCAAAGATGACGTAGCCCCCCGATTGCTCGCAGCCGGCTTTCGCCCAAGTGAAAAAACCGTATTCAGTCTGCTTGG
CGTCTCGTATTATCTGGAAAAAGAGCACTTCTATCGCCTTTTGCACCAACTCGCTCCATTGATGACAGAAGGCAGCTCCA
TCGTGTTTGATTTTGCGGATGAGCAGCTGTTTACCTCCCCCGTCAAGCGGGTGCAAAACACGCTCGCTCTTGCCCAACAA
AGCGGTGAGCCGATGAAAGCGGCGTATTCAATCAAGGAATTGGAACAACAGCTGCAGTACGACCATCTCCTGATTTTCGA
ACACGTATCGCCACAACAAATCCAAACACAATTTTTCTCCAATCGCAATGATGACCTAACGGCGTTTGAACATACCCATT
ACCTTCACGCCGTGCGCAAATAA

Upstream 100 bases:

>100_bases
AAGGAGCGTTTTTGCTGCCGACACTCGGCAAGACGAAAGAGCAGTTTTTCGCCTACGGCCAGAAGATGATTTTCAATAGT
CTCGCAAAGGAGCCATTGCG

Downstream 100 bases:

>100_bases
CCGCTCCTTCATCGGCCGGGAAGCGCTAAACGCCTTCCCGGCCTCATCCATTCAAATAACGGAGGCTTCGGTCGCCATCT
CCTGCACCATCCATTCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKPNEPSMTALMSCFVRAYHTEHDTPVIFRDDMARQLITDEEYKQIQTFLANGLGFFAPERLDAFSSDEEKVKWIVQTQL
APTPIARAAYTERIIHHEKRLGATQYVILGAGLDTFAFRHPNSGLTIFEVDHPNTQQFKRERIHMANWKMPNCLQLVAAD
FTKDDVAPRLLAAGFRPSEKTVFSLLGVSYYLEKEHFYRLLHQLAPLMTEGSSIVFDFADEQLFTSPVKRVQNTLALAQQ
SGEPMKAAYSIKELEQQLQYDHLLIFEHVSPQQIQTQFFSNRNDDLTAFEHTHYLHAVRK

Sequences:

>Translated_300_residues
MKPNEPSMTALMSCFVRAYHTEHDTPVIFRDDMARQLITDEEYKQIQTFLANGLGFFAPERLDAFSSDEEKVKWIVQTQL
APTPIARAAYTERIIHHEKRLGATQYVILGAGLDTFAFRHPNSGLTIFEVDHPNTQQFKRERIHMANWKMPNCLQLVAAD
FTKDDVAPRLLAAGFRPSEKTVFSLLGVSYYLEKEHFYRLLHQLAPLMTEGSSIVFDFADEQLFTSPVKRVQNTLALAQQ
SGEPMKAAYSIKELEQQLQYDHLLIFEHVSPQQIQTQFFSNRNDDLTAFEHTHYLHAVRK
>Mature_300_residues
MKPNEPSMTALMSCFVRAYHTEHDTPVIFRDDMARQLITDEEYKQIQTFLANGLGFFAPERLDAFSSDEEKVKWIVQTQL
APTPIARAAYTERIIHHEKRLGATQYVILGAGLDTFAFRHPNSGLTIFEVDHPNTQQFKRERIHMANWKMPNCLQLVAAD
FTKDDVAPRLLAAGFRPSEKTVFSLLGVSYYLEKEHFYRLLHQLAPLMTEGSSIVFDFADEQLFTSPVKRVQNTLALAQQ
SGEPMKAAYSIKELEQQLQYDHLLIFEHVSPQQIQTQFFSNRNDDLTAFEHTHYLHAVRK

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 34594; Mature: 34594

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNEPSMTALMSCFVRAYHTEHDTPVIFRDDMARQLITDEEYKQIQTFLANGLGFFAPE
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH
RLDAFSSDEEKVKWIVQTQLAPTPIARAAYTERIIHHEKRLGATQYVILGAGLDTFAFRH
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHEEEC
PNSGLTIFEVDHPNTQQFKRERIHMANWKMPNCLQLVAADFTKDDVAPRLLAAGFRPSEK
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
TVFSLLGVSYYLEKEHFYRLLHQLAPLMTEGSSIVFDFADEQLFTSPVKRVQNTLALAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
SGEPMKAAYSIKELEQQLQYDHLLIFEHVSPQQIQTQFFSNRNDDLTAFEHTHYLHAVRK
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPNEPSMTALMSCFVRAYHTEHDTPVIFRDDMARQLITDEEYKQIQTFLANGLGFFAPE
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH
RLDAFSSDEEKVKWIVQTQLAPTPIARAAYTERIIHHEKRLGATQYVILGAGLDTFAFRH
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHEEEC
PNSGLTIFEVDHPNTQQFKRERIHMANWKMPNCLQLVAADFTKDDVAPRLLAAGFRPSEK
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
TVFSLLGVSYYLEKEHFYRLLHQLAPLMTEGSSIVFDFADEQLFTSPVKRVQNTLALAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
SGEPMKAAYSIKELEQQLQYDHLLIFEHVSPQQIQTQFFSNRNDDLTAFEHTHYLHAVRK
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]