| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ytxK [H]
Identifier: 138896326
GI number: 138896326
Start: 2798655
End: 2799578
Strand: Reverse
Name: ytxK [H]
Synonym: GTNG_2689
Alternate gene names: 138896326
Gene position: 2799578-2798655 (Counterclockwise)
Preceding gene: 138896327
Following gene: 138896325
Centisome position: 78.85
GC content: 49.24
Gene sequence:
>924_bases TTGCAATGCACGTATTTAGAAGCGGTCGCCGAAACAGGAGAAAATTTGTTTCACGGCGACGTGTTGCAAGACGAAGTGAG TGAATTAAATGCTAAACGGTTGAAAAAACAATATCGCGAACTCATGCTCGACCGGTTTCAAAATGAGGAAATCCGCAAGG CGTTCCAGCTCGCCGTCTTAAAAGGGATGCGCCAACATATCCAGCCGCACCACCAAATGACCCCGGATGCGGTCAGTTTA TTTTTGGCGTATTTAGTCCGTCGGTTTACACGCCCGCATTTGGCGCTTACCATCCTTGACCCGGCCGTTGGCACGGCGAA TTTATTGACGGCGGTGCTCAACGGTCTTAGTGGCAAACAGGTGAAAAGTTATGGCGTCGATGTGGACGACTTGCTCGTCA AACTCGCGTATGTCAACGCGAACTTGCAAAAACACTCGCTGCAGCTGTTTAACCAAGACAGCTTACGCCCTCTTTTTGTC GAACCGGCCGACGTCATCGTCTGTGATTTGCCGGTCGGCTATTACCCGGATGATGACAATGCGTCTCGTTTTGCTCTAAA AGCGGAAGAAGGGCAGTCATACGCGCACCATTTGTTGATTGAACAAAGCTTGCGGTACACAAAAGACGGCGGTTATTTGT TTTTCCTTATTCCTAATACGTTATTTTCGAGCCCGCAAGCAGAACAGCTGAACCAGTTTCTAAAAGAGACGGCCATCGTC CAAGGCGTGCTGCAGTTGCCGTTGTCGATGTTTAAACATGAACAAGCAGCGAAAAGTGTATTTATTTTGCAAAAGAAAGG ACCGATGGCCAAGCCGCCAAAAAACGTGCTGCTTGCCGAGCTGCCGCGCTTTTCGAACAAGACGGCGATGCAGGCAATGA TGGAAAAAATCGAGGCGTGGATCGCCAACGAGAAGGGAAGTTGA
Upstream 100 bases:
>100_bases AAAAGGAAATGGCCAGAAAGGTGGGATATACGGAATGATGACGCCAGTTGAGCGGCTGTTCACTGTATTGGATGAAACAG CTCATATTTTGCAGGAAGAA
Downstream 100 bases:
>100_bases CGGCCTCCAAAAAGGGAGGCCGTTTTCATTTTTCGCAACATAAAAACTTTTTGTTGCAACCGATTACTGAAGGGGGAAGC GCTTGAAAGAAAAACAAGGG
Product: adenine-specific methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MQCTYLEAVAETGENLFHGDVLQDEVSELNAKRLKKQYRELMLDRFQNEEIRKAFQLAVLKGMRQHIQPHHQMTPDAVSL FLAYLVRRFTRPHLALTILDPAVGTANLLTAVLNGLSGKQVKSYGVDVDDLLVKLAYVNANLQKHSLQLFNQDSLRPLFV EPADVIVCDLPVGYYPDDDNASRFALKAEEGQSYAHHLLIEQSLRYTKDGGYLFFLIPNTLFSSPQAEQLNQFLKETAIV QGVLQLPLSMFKHEQAAKSVFILQKKGPMAKPPKNVLLAELPRFSNKTAMQAMMEKIEAWIANEKGS
Sequences:
>Translated_307_residues MQCTYLEAVAETGENLFHGDVLQDEVSELNAKRLKKQYRELMLDRFQNEEIRKAFQLAVLKGMRQHIQPHHQMTPDAVSL FLAYLVRRFTRPHLALTILDPAVGTANLLTAVLNGLSGKQVKSYGVDVDDLLVKLAYVNANLQKHSLQLFNQDSLRPLFV EPADVIVCDLPVGYYPDDDNASRFALKAEEGQSYAHHLLIEQSLRYTKDGGYLFFLIPNTLFSSPQAEQLNQFLKETAIV QGVLQLPLSMFKHEQAAKSVFILQKKGPMAKPPKNVLLAELPRFSNKTAMQAMMEKIEAWIANEKGS >Mature_307_residues MQCTYLEAVAETGENLFHGDVLQDEVSELNAKRLKKQYRELMLDRFQNEEIRKAFQLAVLKGMRQHIQPHHQMTPDAVSL FLAYLVRRFTRPHLALTILDPAVGTANLLTAVLNGLSGKQVKSYGVDVDDLLVKLAYVNANLQKHSLQLFNQDSLRPLFV EPADVIVCDLPVGYYPDDDNASRFALKAEEGQSYAHHLLIEQSLRYTKDGGYLFFLIPNTLFSSPQAEQLNQFLKETAIV QGVLQLPLSMFKHEQAAKSVFILQKKGPMAKPPKNVLLAELPRFSNKTAMQAMMEKIEAWIANEKGS
Specific function: Unknown
COG id: COG0827
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To type I restriction system adenine methylases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002296 - InterPro: IPR016843 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: NA
Molecular weight: Translated: 34684; Mature: 34684
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCTYLEAVAETGENLFHGDVLQDEVSELNAKRLKKQYRELMLDRFQNEEIRKAFQLAVL CCCHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KGMRQHIQPHHQMTPDAVSLFLAYLVRRFTRPHLALTILDPAVGTANLLTAVLNGLSGKQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCH VKSYGVDVDDLLVKLAYVNANLQKHSLQLFNQDSLRPLFVEPADVIVCDLPVGYYPDDDN HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCC ASRFALKAEEGQSYAHHLLIEQSLRYTKDGGYLFFLIPNTLFSSPQAEQLNQFLKETAIV CCEEEEECCCCHHHHHHHHHHHHHHEECCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHH QGVLQLPLSMFKHEQAAKSVFILQKKGPMAKPPKNVLLAELPRFSNKTAMQAMMEKIEAW HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH IANEKGS HHCCCCC >Mature Secondary Structure MQCTYLEAVAETGENLFHGDVLQDEVSELNAKRLKKQYRELMLDRFQNEEIRKAFQLAVL CCCHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KGMRQHIQPHHQMTPDAVSLFLAYLVRRFTRPHLALTILDPAVGTANLLTAVLNGLSGKQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCH VKSYGVDVDDLLVKLAYVNANLQKHSLQLFNQDSLRPLFVEPADVIVCDLPVGYYPDDDN HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCC ASRFALKAEEGQSYAHHLLIEQSLRYTKDGGYLFFLIPNTLFSSPQAEQLNQFLKETAIV CCEEEEECCCCHHHHHHHHHHHHHHEECCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHH QGVLQLPLSMFKHEQAAKSVFILQKKGPMAKPPKNVLLAELPRFSNKTAMQAMMEKIEAW HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH IANEKGS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8226682 [H]