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The map label for this gene is yjfR [C]

Identifier: 138896312

GI number: 138896312

Start: 2785499

End: 2786179

Strand: Reverse

Name: yjfR [C]

Synonym: GTNG_2675

Alternate gene names: 138896312

Gene position: 2786179-2785499 (Counterclockwise)

Preceding gene: 138896314

Following gene: 138896311

Centisome position: 78.48

GC content: 54.33

Gene sequence:

>681_bases
ATGAAAATCAGCTACCATGGCCATTCAGTTGTTCGCATTGAAACAAACGGAAAAACGATTTTGATCGACCCGTTCATCAC
CGGCAACACAACGACCGACTTGAACGCAGCCGATGTGAAAGCGGACGTCATTTTGTTGACGCACGGGCACGGCGACCATG
TGGGTGATACGGTCGAGATTGCGAAGCGGAACAATGCGCTCGTTGTAGCGACGTTTGAGCTGGCGACGTATTTAAGCTGG
CAAGGGGTCGAGACGTTCGGTATGAACATCGGTGGGGCGCGCGAATTTGACTTTGGCACGGTGAAGTTCACACAGGCATT
TCACAGCTCCGGCTTTGTGACAGAGGACAAACAAATCATTTATTTAGGCATGCCGACTGGCATTTTGTTCACCGCCGAAG
GCAAAACGATCTACCATGCCGGTGACACCGGACTGTTTTCTGACATGAAACTGATCGGCGAGCGTCATTCGATCGATGTG
GCGTTTTTGCCGATCGGCGACAGCTTCACGATGGGACCGGAAGATGCGGCGGTGGCTGCCGAATGGCTTGGGGCGAAGCT
GGTCGTGCCGATCCATTACAACACGTTCCCGCCGATCGCACAAGATCCACAACAGTTCGTTTCGCTTCTCCCACCGGGCG
TCGGACGCGCCTTGCAGCCGGGCGAAAGCATCGAGCTGTAA

Upstream 100 bases:

>100_bases
CGTACCAAGAAACGGGCAAATTGTAAATGGATAAGCGGGAAAAGAAGGAAATGAACGCGCGGCGGCGAACCATGTTTAAG
TGGAAAGGAGAGATGTGACT

Downstream 100 bases:

>100_bases
CCGCCTGTTCCTTGCAGTACAAACTGCTTTTAGCCGCTGTTCATCGAGGGGAAAGGAATTGACCTTTCCTCTCTTTTTGT
CAACAGGACGACATGACCCT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKISYHGHSVVRIETNGKTILIDPFITGNTTTDLNAADVKADVILLTHGHGDHVGDTVEIAKRNNALVVATFELATYLSW
QGVETFGMNIGGAREFDFGTVKFTQAFHSSGFVTEDKQIIYLGMPTGILFTAEGKTIYHAGDTGLFSDMKLIGERHSIDV
AFLPIGDSFTMGPEDAAVAAEWLGAKLVVPIHYNTFPPIAQDPQQFVSLLPPGVGRALQPGESIEL

Sequences:

>Translated_226_residues
MKISYHGHSVVRIETNGKTILIDPFITGNTTTDLNAADVKADVILLTHGHGDHVGDTVEIAKRNNALVVATFELATYLSW
QGVETFGMNIGGAREFDFGTVKFTQAFHSSGFVTEDKQIIYLGMPTGILFTAEGKTIYHAGDTGLFSDMKLIGERHSIDV
AFLPIGDSFTMGPEDAAVAAEWLGAKLVVPIHYNTFPPIAQDPQQFVSLLPPGVGRALQPGESIEL
>Mature_226_residues
MKISYHGHSVVRIETNGKTILIDPFITGNTTTDLNAADVKADVILLTHGHGDHVGDTVEIAKRNNALVVATFELATYLSW
QGVETFGMNIGGAREFDFGTVKFTQAFHSSGFVTEDKQIIYLGMPTGILFTAEGKTIYHAGDTGLFSDMKLIGERHSIDV
AFLPIGDSFTMGPEDAAVAAEWLGAKLVVPIHYNTFPPIAQDPQQFVSLLPPGVGRALQPGESIEL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2675_GEOTN (A4IRR6)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001126765.1
- ProteinModelPortal:   A4IRR6
- STRING:   A4IRR6
- GeneID:   4967601
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_2675
- NMPDR:   fig|420246.5.peg.2581
- eggNOG:   COG2220
- HOGENOM:   HBG741314
- OMA:   VILLTHG
- ProtClustDB:   PRK00685
- BioCyc:   GTHE420246:GTNG_2675-MONOMER
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 24388; Mature: 24388

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISYHGHSVVRIETNGKTILIDPFITGNTTTDLNAADVKADVILLTHGHGDHVGDTVEI
CEEEECCCEEEEEECCCCEEEECCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
AKRNNALVVATFELATYLSWQGVETFGMNIGGAREFDFGTVKFTQAFHSSGFVTEDKQII
EECCCEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEHHCCCCCEECCCEEE
YLGMPTGILFTAEGKTIYHAGDTGLFSDMKLIGERHSIDVAFLPIGDSFTMGPEDAAVAA
EEECCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
EWLGAKLVVPIHYNTFPPIAQDPQQFVSLLPPGVGRALQPGESIEL
HHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKISYHGHSVVRIETNGKTILIDPFITGNTTTDLNAADVKADVILLTHGHGDHVGDTVEI
CEEEECCCEEEEEECCCCEEEECCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
AKRNNALVVATFELATYLSWQGVETFGMNIGGAREFDFGTVKFTQAFHSSGFVTEDKQII
EECCCEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEHHCCCCCEECCCEEE
YLGMPTGILFTAEGKTIYHAGDTGLFSDMKLIGERHSIDVAFLPIGDSFTMGPEDAAVAA
EEECCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
EWLGAKLVVPIHYNTFPPIAQDPQQFVSLLPPGVGRALQPGESIEL
HHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA