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The map label for this gene is yshE [H]

Identifier: 138896256

GI number: 138896256

Start: 2725783

End: 2726190

Strand: Reverse

Name: yshE [H]

Synonym: GTNG_2619

Alternate gene names: 138896256

Gene position: 2726190-2725783 (Counterclockwise)

Preceding gene: 138896257

Following gene: 138896255

Centisome position: 76.79

GC content: 45.59

Gene sequence:

>408_bases
ATGATGCCGTTTTGGGAGCACGACATGGTGAGGACGGCAGCCAATTTTAGCGTCGCAGTATTGTGCATCGTCGTGTTTTT
AGCCTTGTTTGAGCTAGTGACGAAATATAAAAATTGGGAGGAAATCCGCAACGGCAATGTGGCGGTCGCGATGGCGACAG
GCGGAAAGATTTTTGGGATTTCCAACATTTTCCGCTATGCGCTTGACCGCCATGAGTCGCTGTTATCGATGATTGGCTGG
GGCTTATATGGATTTTTACTTTTATTGGCGGCGTACTTTATCTATGAGTTTTTGACGCCAAAGTTTGATATTGATGAAGA
AATTGCCAATGACAACCGAGCAGTCGGCTTTATTTCGATGGTGATTTCCGTTGGCTTGTCGTTTGTGATCGGTGAAGGCA
TTCAGTAA

Upstream 100 bases:

>100_bases
TAAAACAGCACCGGGCGGTAAAAAGCTTCCGGTTCGGTGCGGCGAATGAGGGCGGTACCGGGGTGACGGTCGTCGAACTG
AAATGATAGGGGAGAGAGCG

Downstream 100 bases:

>100_bases
AGGGGAACAAAAGCGATGGACGCAGTAGTGAAAGGGCTGTTAATCATAGTCGGTCTGCTGCTGGTCGCCGGCATTGTTTA
TATGGCGGTTCGCAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MMPFWEHDMVRTAANFSVAVLCIVVFLALFELVTKYKNWEEIRNGNVAVAMATGGKIFGISNIFRYALDRHESLLSMIGW
GLYGFLLLLAAYFIYEFLTPKFDIDEEIANDNRAVGFISMVISVGLSFVIGEGIQ

Sequences:

>Translated_135_residues
MMPFWEHDMVRTAANFSVAVLCIVVFLALFELVTKYKNWEEIRNGNVAVAMATGGKIFGISNIFRYALDRHESLLSMIGW
GLYGFLLLLAAYFIYEFLTPKFDIDEEIANDNRAVGFISMVISVGLSFVIGEGIQ
>Mature_135_residues
MMPFWEHDMVRTAANFSVAVLCIVVFLALFELVTKYKNWEEIRNGNVAVAMATGGKIFGISNIFRYALDRHESLLSMIGW
GLYGFLLLLAAYFIYEFLTPKFDIDEEIANDNRAVGFISMVISVGLSFVIGEGIQ

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 15215; Mature: 15215

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPFWEHDMVRTAANFSVAVLCIVVFLALFELVTKYKNWEEIRNGNVAVAMATGGKIFGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHH
SNIFRYALDRHESLLSMIGWGLYGFLLLLAAYFIYEFLTPKFDIDEEIANDNRAVGFISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
VISVGLSFVIGEGIQ
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MMPFWEHDMVRTAANFSVAVLCIVVFLALFELVTKYKNWEEIRNGNVAVAMATGGKIFGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHH
SNIFRYALDRHESLLSMIGWGLYGFLLLLAAYFIYEFLTPKFDIDEEIANDNRAVGFISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
VISVGLSFVIGEGIQ
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]