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The map label for this gene is etfB [H]

Identifier: 138896251

GI number: 138896251

Start: 2721531

End: 2722307

Strand: Reverse

Name: etfB [H]

Synonym: GTNG_2614

Alternate gene names: 138896251

Gene position: 2722307-2721531 (Counterclockwise)

Preceding gene: 138896252

Following gene: 138896250

Centisome position: 76.68

GC content: 51.09

Gene sequence:

>777_bases
ATGAACATTTTTGTTTTGATGAAACGCACGTTCGACACCGAGGAGAAAATTACCATCAATAACGGCAAAATCAATGAGGA
AGGTGCTGAATTCATCATCAACCCGTACGATGAATACGCCATTGAAGAGGCGATCCAAGTGCGCGACAAACATGGCGGTG
AAGTGACGGTCGTCACCGTCGGCAGCGAGGAAGCGGAAAAAGAGTTGCGCACAGCGCTCGCCATGGGCTGCGACAAAGCG
GTGCTCATCAATATTGAGGATGACGTCGAAGAGCAAGATCAATATACAACGGCGAAAGTGCTCGCTGAATATTTGAAAGA
TAAAAACCCGGATTTGATTTTAGCTGGTAATGTGGCGATTGACGGCGGCTCGGGGCAAGTCGGACCGCGCGTGGCTGAAT
TGCTTGGCATTCCATACGTGACGACGATTACGAAGCTTGACATTGCCGATGGCGGTAAAGTGACCGTTGTGCGTGACGTC
GAGGGGGATGAGGAAGTGATCGAAACGTCGCTGCCGCTCCTTGTTACCGCTCAACAAGGGCTGAATGAGCCGCGCTATCC
GTCGTTACCAGGCATTATGAAAGCGAAAAAGAAACCGCTTGACGAGCTCGAGCTCGATGACTTGGATCTTGACGAGGACG
ATGTCGAGGCGAAAACGAAAACGATCGAAGTGTTCTTGCCGCCGAAGCGGGAAGCGGGCAAAATTTTGCAAGGTGAGATT
GCCGATCAAGTCAAAGAGCTTGTCGGGCTGCTCCGTTCCGAAGCGAAAGTCGTTTAA

Upstream 100 bases:

>100_bases
TAGAAAAACGTCCCCCCGTCTTTCAAGGGAAATAATCGCTATAAATGTCGGAATCTTGGCAACTGAAATAATGTTGGATC
AAACTGAGGAGGGGAATGAC

Downstream 100 bases:

>100_bases
AGCGGCAGACGGTATGGTTGTTAGCGCTCTCTAACGGACGGAAAACATGAACAAAAGGGTAGGGGGACTGAAACATGGCA
CGCAAAGTATTAACATTAGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNIFVLMKRTFDTEEKITINNGKINEEGAEFIINPYDEYAIEEAIQVRDKHGGEVTVVTVGSEEAEKELRTALAMGCDKA
VLINIEDDVEEQDQYTTAKVLAEYLKDKNPDLILAGNVAIDGGSGQVGPRVAELLGIPYVTTITKLDIADGGKVTVVRDV
EGDEEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLDELELDDLDLDEDDVEAKTKTIEVFLPPKREAGKILQGEI
ADQVKELVGLLRSEAKVV

Sequences:

>Translated_258_residues
MNIFVLMKRTFDTEEKITINNGKINEEGAEFIINPYDEYAIEEAIQVRDKHGGEVTVVTVGSEEAEKELRTALAMGCDKA
VLINIEDDVEEQDQYTTAKVLAEYLKDKNPDLILAGNVAIDGGSGQVGPRVAELLGIPYVTTITKLDIADGGKVTVVRDV
EGDEEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLDELELDDLDLDEDDVEAKTKTIEVFLPPKREAGKILQGEI
ADQVKELVGLLRSEAKVV
>Mature_258_residues
MNIFVLMKRTFDTEEKITINNGKINEEGAEFIINPYDEYAIEEAIQVRDKHGGEVTVVTVGSEEAEKELRTALAMGCDKA
VLINIEDDVEEQDQYTTAKVLAEYLKDKNPDLILAGNVAIDGGSGQVGPRVAELLGIPYVTTITKLDIADGGKVTVVRDV
EGDEEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLDELELDDLDLDEDDVEAKTKTIEVFLPPKREAGKILQGEI
ADQVKELVGLLRSEAKVV

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=237, Percent_Identity=34.5991561181435, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI62420877, Length=209, Percent_Identity=36.3636363636364, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=30.2325581395349, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI2367123, Length=238, Percent_Identity=27.7310924369748, Blast_Score=78, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI25141345, Length=256, Percent_Identity=35.9375, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=35.9375, Blast_Score=139, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24651147, Length=236, Percent_Identity=35.5932203389831, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24651145, Length=236, Percent_Identity=35.5932203389831, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28304; Mature: 28304

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFVLMKRTFDTEEKITINNGKINEEGAEFIINPYDEYAIEEAIQVRDKHGGEVTVVTV
CCEEEEEEECCCCCCEEEEECCEECCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEE
GSEEAEKELRTALAMGCDKAVLINIEDDVEEQDQYTTAKVLAEYLKDKNPDLILAGNVAI
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEE
DGGSGQVGPRVAELLGIPYVTTITKLDIADGGKVTVVRDVEGDEEVIETSLPLLVTAQQG
ECCCCCCCHHHHHHHCCCHHHEEEEEEECCCCEEEEEEECCCCHHHHHHCCCEEEEEHHC
LNEPRYPSLPGIMKAKKKPLDELELDDLDLDEDDVEAKTKTIEVFLPPKREAGKILQGEI
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHCCHHHHHH
ADQVKELVGLLRSEAKVV
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIFVLMKRTFDTEEKITINNGKINEEGAEFIINPYDEYAIEEAIQVRDKHGGEVTVVTV
CCEEEEEEECCCCCCEEEEECCEECCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEE
GSEEAEKELRTALAMGCDKAVLINIEDDVEEQDQYTTAKVLAEYLKDKNPDLILAGNVAI
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEE
DGGSGQVGPRVAELLGIPYVTTITKLDIADGGKVTVVRDVEGDEEVIETSLPLLVTAQQG
ECCCCCCCHHHHHHHCCCHHHEEEEEEECCCCEEEEEEECCCCHHHHHHCCCEEEEEHHC
LNEPRYPSLPGIMKAKKKPLDELELDDLDLDEDDVEAKTKTIEVFLPPKREAGKILQGEI
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHCCHHHHHH
ADQVKELVGLLRSEAKVV
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]