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The map label for this gene is 138896017

Identifier: 138896017

GI number: 138896017

Start: 2493876

End: 2495039

Strand: Reverse

Name: 138896017

Synonym: GTNG_2380

Alternate gene names: NA

Gene position: 2495039-2493876 (Counterclockwise)

Preceding gene: 138896018

Following gene: 138896015

Centisome position: 70.28

GC content: 53.87

Gene sequence:

>1164_bases
ATGCACATTCAAGCATGGCCAGGAGATACGTTTGAGAAGTATGGGCGATGGTTTGGTGTGCCGACCGAGTTAATCATGGA
CGCCAATTTGCACGTTGAAAAGGGAAGGCTATGCCCGGGACAGACGGTTGCTATTCCAGGATATGACATGATGGATACGT
GGGAAGCGCTCGCTAGCTGCCTGTCGCTGCCGGTCGAGGCGCTGCAGCGGCTGCCGGGGGCGATGGCGGTCATCAACGGA
ACAGTACCGTTGCCGAAGCGGATCATTTCCCCTGTTGTCCGTCGCGCCCAGCCTTATGATTTTGCCGCTCTTGCCGAAGA
TATTGAAGCGATTATTCGCTGCTATCCATTTGTGCGCCGACGGACGATCGGTCATAGTGTGCTCGGCTTGCCGCTTGTCG
AGCTGCAAATTGGCCGTGGGCCCGTGCGCATCCATATGAACGGATCATTCCATGCTAATGAGTGGATTACAACGGCGGTG
TTAATGGCGCTCATTGATGATTATTTACGAGCGCTTGTCGATGATGCCGTGCTTGCTGGCCATCGGGTGCTTGAATATTA
CCATAAAGTTACCCTTTCGATCGTGCCGATGGTCAACCCGGATGGTGTCAACCTCGTGCTTAACGGCCCGCCCGAAGAGG
AGACATACCGAAACGACGTCGTCCGCATCAACGGCGGTTCGCTCGATTTTTCACAATGGAAAGCGAATATTCGCGGCGTT
GATTTAAACAATCAATTTCCGGCTCGCTGGGAAATTGAACAGGCTCGCAAACCACCAAAAGCACCGGCACCGCGTGATTT
TCCAGGCTTTGCCCCCCTCACTGAGCCGGAGGCGAAGGCGATGGCAGCGTTGGCGGAAACAAGCGATTTTGCCATGGTTG
TCGCGTTTCATACACAAGGAAAAGAAATTTACTGGGGATATGAAGGATTGGAACCATTCGAAGCGGAAGCGACCGTCAAG
GCGATGGCGGAAGCAAGCGGATACAAGGCTATCCGCTACATTGACAGCCATGCTGGCTATCGCGATTGGTTCATTCAGAT
GTGGAAGCGGCGTGGCTATACGGTCGAGCTCGGAGAGGGCGTCAATCCGCTGCCGCTCTCACAATTTGCGCAAATTTACC
AAGAGGCCCTTGGCCTGTTCTTAGCAACGCTCAAAATGGCGTAA

Upstream 100 bases:

>100_bases
AACAACGGCTGGCTGCCATATGGCGGCAAGCCGTTGTTTTCATTTTTTGGCGTCCATTGACATATGTTGGAGATAGAAGA
ATAGGAAGGAGAGACGGCGC

Downstream 100 bases:

>100_bases
AAAAACGCAAGAGGCTCGATTTGCCTCTTGCCTTTTTAATGTGTGCCGGTCGGAATTCCGTTATGCAAAATTGTCATGAT
CGTAAACCAGCCGAATACAG

Product: endopeptidase I

Products: NA

Alternate protein names: Endopeptidase I; Gamma-D-glutamyl-L-diamino acid endopeptidase I; Gamma-D-glutamyl-meso-diaminopimelate peptidase I [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MHIQAWPGDTFEKYGRWFGVPTELIMDANLHVEKGRLCPGQTVAIPGYDMMDTWEALASCLSLPVEALQRLPGAMAVING
TVPLPKRIISPVVRRAQPYDFAALAEDIEAIIRCYPFVRRRTIGHSVLGLPLVELQIGRGPVRIHMNGSFHANEWITTAV
LMALIDDYLRALVDDAVLAGHRVLEYYHKVTLSIVPMVNPDGVNLVLNGPPEEETYRNDVVRINGGSLDFSQWKANIRGV
DLNNQFPARWEIEQARKPPKAPAPRDFPGFAPLTEPEAKAMAALAETSDFAMVVAFHTQGKEIYWGYEGLEPFEAEATVK
AMAEASGYKAIRYIDSHAGYRDWFIQMWKRRGYTVELGEGVNPLPLSQFAQIYQEALGLFLATLKMA

Sequences:

>Translated_387_residues
MHIQAWPGDTFEKYGRWFGVPTELIMDANLHVEKGRLCPGQTVAIPGYDMMDTWEALASCLSLPVEALQRLPGAMAVING
TVPLPKRIISPVVRRAQPYDFAALAEDIEAIIRCYPFVRRRTIGHSVLGLPLVELQIGRGPVRIHMNGSFHANEWITTAV
LMALIDDYLRALVDDAVLAGHRVLEYYHKVTLSIVPMVNPDGVNLVLNGPPEEETYRNDVVRINGGSLDFSQWKANIRGV
DLNNQFPARWEIEQARKPPKAPAPRDFPGFAPLTEPEAKAMAALAETSDFAMVVAFHTQGKEIYWGYEGLEPFEAEATVK
AMAEASGYKAIRYIDSHAGYRDWFIQMWKRRGYTVELGEGVNPLPLSQFAQIYQEALGLFLATLKMA
>Mature_387_residues
MHIQAWPGDTFEKYGRWFGVPTELIMDANLHVEKGRLCPGQTVAIPGYDMMDTWEALASCLSLPVEALQRLPGAMAVING
TVPLPKRIISPVVRRAQPYDFAALAEDIEAIIRCYPFVRRRTIGHSVLGLPLVELQIGRGPVRIHMNGSFHANEWITTAV
LMALIDDYLRALVDDAVLAGHRVLEYYHKVTLSIVPMVNPDGVNLVLNGPPEEETYRNDVVRINGGSLDFSQWKANIRGV
DLNNQFPARWEIEQARKPPKAPAPRDFPGFAPLTEPEAKAMAALAETSDFAMVVAFHTQGKEIYWGYEGLEPFEAEATVK
AMAEASGYKAIRYIDSHAGYRDWFIQMWKRRGYTVELGEGVNPLPLSQFAQIYQEALGLFLATLKMA

Specific function: An endopeptidase which hydrolyzes the gamma-D-Glu- (L)meso-diaminopimelic acid bond of L-Ala-gamma-D-Glu-(L)meso- diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. It is active on spore cortex peptidoglycan [H]

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF00246 Peptidase_M14 [H]

EC number: =3.4.19.11 [H]

Molecular weight: Translated: 43251; Mature: 43251

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIQAWPGDTFEKYGRWFGVPTELIMDANLHVEKGRLCPGQTVAIPGYDMMDTWEALASC
CCCCCCCCCHHHHHCCCCCCCHHHEECCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHH
LSLPVEALQRLPGAMAVINGTVPLPKRIISPVVRRAQPYDFAALAEDIEAIIRCYPFVRR
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RTIGHSVLGLPLVELQIGRGPVRIHMNGSFHANEWITTAVLMALIDDYLRALVDDAVLAG
HHHCCHHHCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRVLEYYHKVTLSIVPMVNPDGVNLVLNGPPEEETYRNDVVRINGGSLDFSQWKANIRGV
HHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCHHCCCEEEEECCCCCHHHHHCCCEEE
DLNNQFPARWEIEQARKPPKAPAPRDFPGFAPLTEPEAKAMAALAETSDFAMVVAFHTQG
ECCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
KEIYWGYEGLEPFEAEATVKAMAEASGYKAIRYIDSHAGYRDWFIQMWKRRGYTVELGEG
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHHCCCEEECCCC
VNPLPLSQFAQIYQEALGLFLATLKMA
CCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHIQAWPGDTFEKYGRWFGVPTELIMDANLHVEKGRLCPGQTVAIPGYDMMDTWEALASC
CCCCCCCCCHHHHHCCCCCCCHHHEECCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHH
LSLPVEALQRLPGAMAVINGTVPLPKRIISPVVRRAQPYDFAALAEDIEAIIRCYPFVRR
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RTIGHSVLGLPLVELQIGRGPVRIHMNGSFHANEWITTAVLMALIDDYLRALVDDAVLAG
HHHCCHHHCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRVLEYYHKVTLSIVPMVNPDGVNLVLNGPPEEETYRNDVVRINGGSLDFSQWKANIRGV
HHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCHHCCCEEEEECCCCCHHHHHCCCEEE
DLNNQFPARWEIEQARKPPKAPAPRDFPGFAPLTEPEAKAMAALAETSDFAMVVAFHTQG
ECCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
KEIYWGYEGLEPFEAEATVKAMAEASGYKAIRYIDSHAGYRDWFIQMWKRRGYTVELGEG
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHHCCCEEECCCC
VNPLPLSQFAQIYQEALGLFLATLKMA
CCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8503890; 3922755 [H]