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The map label for this gene is yecS [C]

Identifier: 138895921

GI number: 138895921

Start: 2397840

End: 2398553

Strand: Reverse

Name: yecS [C]

Synonym: GTNG_2280

Alternate gene names: 138895921

Gene position: 2398553-2397840 (Counterclockwise)

Preceding gene: 138895922

Following gene: 138895920

Centisome position: 67.56

GC content: 46.92

Gene sequence:

>714_bases
ATGATTTGGGATTGGAATATAGTGAAAGATGTATTTCCGTTAATTTTTCGAGCCATGTGGCTGACGCTGGGGCTTACCTT
GGCTTGTTATGCCGTCTCGTTAGTGCTTGGCATCATCTGGACGCTGCTGCGTCGTGCACCATGGGCGTGGTTTCGATGGA
CTGTGAACGGAGTGTTAGAGTTTATTCGTTCAACCCCTCCTCTTGTTCAGTTGTACTTCCTGTTTTACGCTTGGCCGCTT
GTACCGCACGTCGGGGTAACGCTCTCTCCAATTGCAGCAGCGATCATCGGGTTGGGCGTGCATTATAGCACATATACGTC
TGAAGTATACCGATCTGGCATTGATGCAGTGGATAAGGGGCAATGGGAAGCCGCCTTGGCGCTCAATTTTTCCCGGGCTC
GCACATGGACAAAAGTGATCTTGCCGCAGGCAATCCCACCGATCATCCCAATGCTTGGAAACTATTTGATCATTATGTTC
AAAGAAATTCCAACTACTGCATCGATTGGGGTGATGGGGATGATGTTAACGGCCAAAATGTATGGAGCCCAACACTGGGT
GTATCTCGAGCCGTTTACGATCGTTGCCTTTTTCTTCTTATTATTAAGTTATCCGTCATCGTTATTCGTTCAATGGTTGG
AAAAGAAAATGAATCGGCGATTTGATAAAAACGAGGTGTTGCATGAAGCAAAACAGAAGGGAGTGGTTGTATGA

Upstream 100 bases:

>100_bases
TTTTCGCCATGATGCTTGTGTTCTATTTCCTCATCGCTCTTCCGCTTATTTGGCTAACCCGGCGTGCGGAACGAGCGGTG
TCAAAGGGGATGGCGAGCTA

Downstream 100 bases:

>100_bases
CTAGACCGATGGTGAGCTACAAAAATGTTCGGAAATCGTTTGGACAAATAGAAGTGTTAAAAGGGGTTAATTTGGAGATC
GGTGAAGGGGAAAAAGTGGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIWDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLEFIRSTPPLVQLYFLFYAWPL
VPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSGIDAVDKGQWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMF
KEIPTTASIGVMGMMLTAKMYGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDKNEVLHEAKQKGVVV

Sequences:

>Translated_237_residues
MIWDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLEFIRSTPPLVQLYFLFYAWPL
VPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSGIDAVDKGQWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMF
KEIPTTASIGVMGMMLTAKMYGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDKNEVLHEAKQKGVVV
>Mature_237_residues
MIWDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLEFIRSTPPLVQLYFLFYAWPL
VPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSGIDAVDKGQWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMF
KEIPTTASIGVMGMMLTAKMYGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDKNEVLHEAKQKGVVV

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=28.3720930232558, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787030, Length=222, Percent_Identity=30.1801801801802, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=23.2876712328767, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082239, Length=203, Percent_Identity=30.0492610837438, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787087, Length=242, Percent_Identity=24.3801652892562, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=23.8317757009346, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=24.4239631336406, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27192; Mature: 27192

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FIRSTPPLVQLYFLFYAWPLVPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSGIDAVDKG
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
QWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMFKEIPTTASIGVMGMMLTAKM
CCHHHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHH
YGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDKNEVLHEAKQKGVVV
HCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIWDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FIRSTPPLVQLYFLFYAWPLVPHVGVTLSPIAAAIIGLGVHYSTYTSEVYRSGIDAVDKG
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
QWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMFKEIPTTASIGVMGMMLTAKM
CCHHHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHH
YGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDKNEVLHEAKQKGVVV
HCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]