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The map label for this gene is yycB [H]

Identifier: 138895894

GI number: 138895894

Start: 2370052

End: 2371251

Strand: Reverse

Name: yycB [H]

Synonym: GTNG_2253

Alternate gene names: 138895894

Gene position: 2371251-2370052 (Counterclockwise)

Preceding gene: 138895895

Following gene: 138895892

Centisome position: 66.79

GC content: 55.67

Gene sequence:

>1200_bases
ATGAGGCAAAAAAGTGCGGCGGCGAGTACAGCGACTTCTTCGGTATTCATGGTGGCCGCAGTCGTCGTCTTAGCTGCCAA
CTTGCGCGCACCGATCACTACGGTCGGCCCGCTCGTTCCTGAACTGCAGCGGGAGCTTGGCCTTTCCTACGCCGCTGCCG
GGGCGCTAACGACGATTCCGCTGTTGGCGTTTGCTTTGTTGGCGCCGGCGGCGGCTACGTTTGCCCGCCGGATCGGGATG
GAGCGAACGCTGTTTTGTTCACTCGTCGTCTTGCTCGTAGGCGAACTCATCCGTCCGCTGGCAGGCAGTTTCTGGCTGTT
TGCCGGTACAGCGCTCATCGGTGCGGCGATCGCTGTCAACAATGTCCTCATGCCAGCGCTTGTTAAAGACGCGTTTCCTA
TGCGTGTTGGCTTAATGATGGGGGTTTATACGGTGACGATGAACGTCAGTGCCGCCTTTGCTTCCGGTCTTGCTGTTCCG
CTTGCTGACGGGTGGGGGATTGGCTGGGAAGGAGCGTTTCGCTTTTGGGCGTTGCTTACTCTGGTCGCAATTGTAGTCTG
GCTGCCGCAAATTTATCGATGGAAATCCGCTAGCGCTCCATCGGGAAAACGACGTTCGTCATTTTGGCGTTCATGGCTTG
CTTGGCAAGTGACGTTATTTATGGGAATGCAATCATTTTTCTTTTATTGCGTGATTACGTGGCTGCCAGAGCTTGGGCAA
GGCAAAGGAATGGCGGCCGATACGGCCGGCTGGTTATTGTTTTTCTTCCAATTTGCCCAGCTGCCGATGATGTTTTTATC
TCCGATGTTGGCCGAGCGGATGAAAGATCAAAAAGTGTTGATCGGTTCATCGGTGCTGTTGAAAGTGGCTGGGATCGTCG
CGTTGTTAGTTGGCCAAGGATGGTGGCTGTGGACGGGGGCGTTCTTTGCCGGTGTCGGTGCTGGCATGTCGTTTTCCCTT
GCGATGATGCTGTTTACGCTGCGGACGCGCCGCCCGCTAGAGGCTGCCCAACTTTCTGCTATGGCCCAGTTCGTTGGTTA
CTTACTGGCGGCGGCCGGTCCACCGTTGTTTGGGGCGTTGTACGATAAGGCCGGCCATTTCATCCCCTCCCTCGTTTTAC
TGTTGATTGTCTGTGCCGCCATGATGGTGTTCGGTTTGGGGGCGGCAAAGGACAAGTATGTGGATGATGATGTTGTGTAG

Upstream 100 bases:

>100_bases
CGAGGAAGCGCGCCGACGCGATGAGCAGAAGTCGTTTGCTGAGCTGCTTGAAGAAAGTGAACTTGATTGGCGCAAGTTTA
AATGAAGGGGGAAAAGATAG

Downstream 100 bases:

>100_bases
TGGGAGGGGCGAAACAAGACGTATCGCCTGACTCATATAGGCAGAAAAAAGAGCCCGTAAGCGGCCGTGCTGGCGCCTTG
GGCTCTTCTTTTTGTTTAGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRQKSAAASTATSSVFMVAAVVVLAANLRAPITTVGPLVPELQRELGLSYAAAGALTTIPLLAFALLAPAAATFARRIGM
ERTLFCSLVVLLVGELIRPLAGSFWLFAGTALIGAAIAVNNVLMPALVKDAFPMRVGLMMGVYTVTMNVSAAFASGLAVP
LADGWGIGWEGAFRFWALLTLVAIVVWLPQIYRWKSASAPSGKRRSSFWRSWLAWQVTLFMGMQSFFFYCVITWLPELGQ
GKGMAADTAGWLLFFFQFAQLPMMFLSPMLAERMKDQKVLIGSSVLLKVAGIVALLVGQGWWLWTGAFFAGVGAGMSFSL
AMMLFTLRTRRPLEAAQLSAMAQFVGYLLAAAGPPLFGALYDKAGHFIPSLVLLLIVCAAMMVFGLGAAKDKYVDDDVV

Sequences:

>Translated_399_residues
MRQKSAAASTATSSVFMVAAVVVLAANLRAPITTVGPLVPELQRELGLSYAAAGALTTIPLLAFALLAPAAATFARRIGM
ERTLFCSLVVLLVGELIRPLAGSFWLFAGTALIGAAIAVNNVLMPALVKDAFPMRVGLMMGVYTVTMNVSAAFASGLAVP
LADGWGIGWEGAFRFWALLTLVAIVVWLPQIYRWKSASAPSGKRRSSFWRSWLAWQVTLFMGMQSFFFYCVITWLPELGQ
GKGMAADTAGWLLFFFQFAQLPMMFLSPMLAERMKDQKVLIGSSVLLKVAGIVALLVGQGWWLWTGAFFAGVGAGMSFSL
AMMLFTLRTRRPLEAAQLSAMAQFVGYLLAAAGPPLFGALYDKAGHFIPSLVLLLIVCAAMMVFGLGAAKDKYVDDDVV
>Mature_399_residues
MRQKSAAASTATSSVFMVAAVVVLAANLRAPITTVGPLVPELQRELGLSYAAAGALTTIPLLAFALLAPAAATFARRIGM
ERTLFCSLVVLLVGELIRPLAGSFWLFAGTALIGAAIAVNNVLMPALVKDAFPMRVGLMMGVYTVTMNVSAAFASGLAVP
LADGWGIGWEGAFRFWALLTLVAIVVWLPQIYRWKSASAPSGKRRSSFWRSWLAWQVTLFMGMQSFFFYCVITWLPELGQ
GKGMAADTAGWLLFFFQFAQLPMMFLSPMLAERMKDQKVLIGSSVLLKVAGIVALLVGQGWWLWTGAFFAGVGAGMSFSL
AMMLFTLRTRRPLEAAQLSAMAQFVGYLLAAAGPPLFGALYDKAGHFIPSLVLLLIVCAAMMVFGLGAAKDKYVDDDVV

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=388, Percent_Identity=38.659793814433, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1786536, Length=385, Percent_Identity=25.1948051948052, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42867; Mature: 42867

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]