| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is spmA [H]
Identifier: 138895854
GI number: 138895854
Start: 2337709
End: 2338305
Strand: Reverse
Name: spmA [H]
Synonym: GTNG_2213
Alternate gene names: 138895854
Gene position: 2338305-2337709 (Counterclockwise)
Preceding gene: 138895855
Following gene: 138895853
Centisome position: 65.86
GC content: 53.43
Gene sequence:
>597_bases ATGGTTAACCTCATTTGGGTGATGATGGCGCTTATCGGTATCGTCTTTGCTGCGGCCAATGGCACGATGGAGGAAGTGAA TAAGGCGGTGTTCGAAAGCGCCAAAGAAGCGGTGACGATCAGCATCGGTATGATCAGCATTTTAGTGTTTTGGCTCGGAC TGATGGCCATCGCTGAGCAGGCCGGTTTGCTTCATAAAGTCGCGCGCCTGTTTATGCCGCTTGTGCGTCGCCTGTTCCCG GAAGTGCCGCCCGGCCATCCGGCGCTCGGCTATATCGTCTCAAACATGGTCGCCAATATGTTCGGTCTTGGCAATGCGGC GACGCCGATGGGGATTAAAGCGATGGAGCAGCTGAAGCAACTCAACGGCGGTGGCGACGAAGCAAGCCGGTCAATGGTGA CGTTTTTAGCCATTAATACGTCAAGCATTACGCTTATTCCGGCGACCGTCATTTCGATTCGCATGACGTACGGTTCAGCA TCACCAGGCGAAATTATCGGCACGACGGTCGTCGCTTCAACGATTTCGACGATCGGGGCGGTGTTGATTGATCGGTATTA TTATTGGAAACGAACGCGGAAAGGCAGGAAGCCATAA
Upstream 100 bases:
>100_bases CAGGCGGTCGATGCGGTGCCGCTTTTCTATGAGCCGGAGAAGGACGAACGCAGCCGGGGGCTCTTTTCGCAAGCATTTCG ATTTTTAGGTGTGAGAAGCG
Downstream 100 bases:
>100_bases TGGCTATCGTCCAACTTCTTTCAGTTTGGCTTATTCCGGGGCTCATCGCCTTTATTTTGCTCTATGGCACGGCGAAAAAA GTGCCTACATATGAGGCGTT
Product: spore maturation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MVNLIWVMMALIGIVFAAANGTMEEVNKAVFESAKEAVTISIGMISILVFWLGLMAIAEQAGLLHKVARLFMPLVRRLFP EVPPGHPALGYIVSNMVANMFGLGNAATPMGIKAMEQLKQLNGGGDEASRSMVTFLAINTSSITLIPATVISIRMTYGSA SPGEIIGTTVVASTISTIGAVLIDRYYYWKRTRKGRKP
Sequences:
>Translated_198_residues MVNLIWVMMALIGIVFAAANGTMEEVNKAVFESAKEAVTISIGMISILVFWLGLMAIAEQAGLLHKVARLFMPLVRRLFP EVPPGHPALGYIVSNMVANMFGLGNAATPMGIKAMEQLKQLNGGGDEASRSMVTFLAINTSSITLIPATVISIRMTYGSA SPGEIIGTTVVASTISTIGAVLIDRYYYWKRTRKGRKP >Mature_198_residues MVNLIWVMMALIGIVFAAANGTMEEVNKAVFESAKEAVTISIGMISILVFWLGLMAIAEQAGLLHKVARLFMPLVRRLFP EVPPGHPALGYIVSNMVANMFGLGNAATPMGIKAMEQLKQLNGGGDEASRSMVTFLAINTSSITLIPATVISIRMTYGSA SPGEIIGTTVVASTISTIGAVLIDRYYYWKRTRKGRKP
Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]
COG id: COG2715
COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 21307; Mature: 21307
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLIWVMMALIGIVFAAANGTMEEVNKAVFESAKEAVTISIGMISILVFWLGLMAIAEQ CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH AGLLHKVARLFMPLVRRLFPEVPPGHPALGYIVSNMVANMFGLGNAATPMGIKAMEQLKQ HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LNGGGDEASRSMVTFLAINTSSITLIPATVISIRMTYGSASPGEIIGTTVVASTISTIGA HCCCCCHHHHHHHHHEEECCCCEEEHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHH VLIDRYYYWKRTRKGRKP HHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVNLIWVMMALIGIVFAAANGTMEEVNKAVFESAKEAVTISIGMISILVFWLGLMAIAEQ CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH AGLLHKVARLFMPLVRRLFPEVPPGHPALGYIVSNMVANMFGLGNAATPMGIKAMEQLKQ HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LNGGGDEASRSMVTFLAINTSSITLIPATVISIRMTYGSASPGEIIGTTVVASTISTIGA HCCCCCHHHHHHHHHEEECCCCEEEHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHH VLIDRYYYWKRTRKGRKP HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 1548223; 9384377; 7642500 [H]