| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is 138895772
Identifier: 138895772
GI number: 138895772
Start: 2258760
End: 2259293
Strand: Reverse
Name: 138895772
Synonym: GTNG_2128
Alternate gene names: NA
Gene position: 2259293-2258760 (Counterclockwise)
Preceding gene: 138895773
Following gene: 138895771
Centisome position: 63.64
GC content: 46.82
Gene sequence:
>534_bases ATGACGCACGTATCCGTCAATGAAAAAAAAGAGTTCATCCGTTGGTTTTTAAGCCATTATCAGTTGAAACGGCGCGAATG TGTTTGGATTTTAAACTATTTGATGAGCCATGACCAGCTGATGCAAAAGGTGCATTTTGTTGAGAACGCCCAATATTGCC CGCGCGGCATCGTCATGTCGACCCACTGCGTGGATGATGTGCCGTTTCGCTTTTACAAAGGCAATGTGATGACGACCGAT GCGGAGAAATCGTTCCATGATATCCGGTTGAACCGTGACGAAGATATTTACATTCAGCTCAATTTCCGCGCTTCTTTTCA CTCGCCGCAATATGTTGCTGTACTTGAAGAAAACCCGTATGCACCGAAGCAGGCGCAAGTGAGCGAAAACGATCAGCGTC TTGCTGAGCAATTTTTAGAACGGTCCATTTATGAGTTCCGGCGTGAGCGGCTCATGAAACTGATCGATGAGGCGCTTGAT CGCCACGACGAAGAGGCGTTTCGCCGGTTGACCGATGAATTAAACAAATTGTAA
Upstream 100 bases:
>100_bases GCCACACGGAGGCGGCCGAGATGCTGCTTGAGCTCGAAGAGTAGGGGAGAAGCGGTGATCGAACCTCTTTCTTGGAAACC GATCGAGGGGGAAGCGCACA
Downstream 100 bases:
>100_bases CACCTTGCCGCAGGCAAGGTTTTTCTTTTGTCGAAAAATATGGTATGGTGATAAGGAACAAACTTTATGGCAAAGGGGAA TAGCGATGAAATGGACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTHVSVNEKKEFIRWFLSHYQLKRRECVWILNYLMSHDQLMQKVHFVENAQYCPRGIVMSTHCVDDVPFRFYKGNVMTTD AEKSFHDIRLNRDEDIYIQLNFRASFHSPQYVAVLEENPYAPKQAQVSENDQRLAEQFLERSIYEFRRERLMKLIDEALD RHDEEAFRRLTDELNKL
Sequences:
>Translated_177_residues MTHVSVNEKKEFIRWFLSHYQLKRRECVWILNYLMSHDQLMQKVHFVENAQYCPRGIVMSTHCVDDVPFRFYKGNVMTTD AEKSFHDIRLNRDEDIYIQLNFRASFHSPQYVAVLEENPYAPKQAQVSENDQRLAEQFLERSIYEFRRERLMKLIDEALD RHDEEAFRRLTDELNKL >Mature_176_residues THVSVNEKKEFIRWFLSHYQLKRRECVWILNYLMSHDQLMQKVHFVENAQYCPRGIVMSTHCVDDVPFRFYKGNVMTTDA EKSFHDIRLNRDEDIYIQLNFRASFHSPQYVAVLEENPYAPKQAQVSENDQRLAEQFLERSIYEFRRERLMKLIDEALDR HDEEAFRRLTDELNKL
Specific function: Unknown
COG id: COG5582
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0302 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011188 - InterPro: IPR014957 - InterPro: IPR014963 [H]
Pfam domain/function: PF08858 IDEAL; PF08864 UPF0302 [H]
EC number: NA
Molecular weight: Translated: 21480; Mature: 21348
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHVSVNEKKEFIRWFLSHYQLKRRECVWILNYLMSHDQLMQKVHFVENAQYCPRGIVMS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE THCVDDVPFRFYKGNVMTTDAEKSFHDIRLNRDEDIYIQLNFRASFHSPQYVAVLEENPY CCCCCCCCCEEEECCEEECCHHHHHHHEECCCCCEEEEEEEEEECCCCCCEEEEEECCCC APKQAQVSENDQRLAEQFLERSIYEFRRERLMKLIDEALDRHDEEAFRRLTDELNKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure THVSVNEKKEFIRWFLSHYQLKRRECVWILNYLMSHDQLMQKVHFVENAQYCPRGIVMS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE THCVDDVPFRFYKGNVMTTDAEKSFHDIRLNRDEDIYIQLNFRASFHSPQYVAVLEENPY CCCCCCCCCEEEECCEEECCHHHHHHHEECCCCCEEEEEEEEEECCCCCCEEEEEECCCC APKQAQVSENDQRLAEQFLERSIYEFRRERLMKLIDEALDRHDEEAFRRLTDELNKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA