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The map label for this gene is ypiA [H]

Identifier: 138895773

GI number: 138895773

Start: 2259350

End: 2260606

Strand: Reverse

Name: ypiA [H]

Synonym: GTNG_2129

Alternate gene names: 138895773

Gene position: 2260606-2259350 (Counterclockwise)

Preceding gene: 138895774

Following gene: 138895772

Centisome position: 63.67

GC content: 50.36

Gene sequence:

>1257_bases
ATGACACGCGTTGAACAAATCATTCGTCTAGTAGAAAACGGAAATGTTGACAAAGCATTGGCGCTCGTCCCGAAAGTGAA
AAAGTATGGCAGCGATGAGGAGAAATATGAGCTTGCTGACTGCTTGTATGCATGGGGAATGCCGGAGGAGGCAAAAGGGC
TGCTCGAGGAGTTGGCCGCCCGCTATCCGGATGATGGCGACATCCGCTTGTTTTTAGCTGAAGTGTATACGGAACTGGAA
GCTGAAGATGAAGCGCTCGCCATTTTGGACGAGATCAGTGAAGACGATCCACAGTTCGTTCGGGCGTGCCTGCTAGCCGC
TGACTTATACGAAATGCAAGGACTGACGGAAGTGAGCGAGCGAAAATTGCGCCAAGCGTATAAAAAGGCACCGGATGAGC
CGGTCGTCCAATTCGCCTTGGCGGAATTGTATTTTTCGCTCGGCGAATACGCGAAAAGCGTGCCGTTTTATGAACAAGTG
CAAAAAAGCACGCGCGAGATGGCTGGCGTTCTCTTGGTGGAACGGCTTGCCGAGGCGCTCACCCGATCCGGGGAGTTTGA
GGCGGCCCTCCCGTATTATGAAGAAGCGCTCAACGAAAAAACGGACAGCCGGACATTGTTCGCCTACGGATTCACAGCCC
TACAGGCCGGTTATGCACAAACGGCCATCGACAAGCTCAGCGCCTTAAAAGAGCTCGATCCAGACTATGCTCCCCTTTAC
TTATATTTGGCGAAAGCTTATGAACAAGAAGGACAGCTCCGAAAAAGTTATGAGACGGCGCTTGAAGGGATAAAAATCGA
TGAGTGGAATAAAGAGCTCCGTCTTTATATCGGCAAACTGGCCTTAAAGCTGAACAAACCGGCTGAAGCGGAAGAGCAGC
TGAAAAAGGCGCTCGAGATCGATGGCGGCTATATTGAGGCACTTACTGTTTTATCGGCGCTTTGGCTTCACGAACAGCGC
TATGAGGATGTAGTGGCGCTTTTGGAGCGGGCGATGGCTGACGGTGAATACGATCCGCAGTTTGAATGGGATTTAGGGCG
TGCCAAACATCGACTCGAGATGTATGACGATGCATTAAATCATTACGCTGAGGCATATAATTTCTTTAAGAATAACGTCG
ATTTTCTTGAAGAGTACGGATATTTTCTCATCGAGGAAGGAAATCGGGCTGCAGCGAGAGAAATATTTCAACAAATCGTC
GGTTTGGACCCGAGCCACACGGAGGCGGCCGAGATGCTGCTTGAGCTCGAAGAGTAG

Upstream 100 bases:

>100_bases
ATGTTCCCATTGCAGTAGTACATAAATATTCAGACAGGGAGAGGGCGGATAACATCGCCCACTAAACAACAATCTGTCGC
GATAAGAGAGGTTCACGGAA

Downstream 100 bases:

>100_bases
GGGAGAAGCGGTGATCGAACCTCTTTCTTGGAAACCGATCGAGGGGGAAGCGCACAATGACGCACGTATCCGTCAATGAA
AAAAAAGAGTTCATCCGTTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTRVEQIIRLVENGNVDKALALVPKVKKYGSDEEKYELADCLYAWGMPEEAKGLLEELAARYPDDGDIRLFLAEVYTELE
AEDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSERKLRQAYKKAPDEPVVQFALAELYFSLGEYAKSVPFYEQV
QKSTREMAGVLLVERLAEALTRSGEFEAALPYYEEALNEKTDSRTLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLY
LYLAKAYEQEGQLRKSYETALEGIKIDEWNKELRLYIGKLALKLNKPAEAEEQLKKALEIDGGYIEALTVLSALWLHEQR
YEDVVALLERAMADGEYDPQFEWDLGRAKHRLEMYDDALNHYAEAYNFFKNNVDFLEEYGYFLIEEGNRAAAREIFQQIV
GLDPSHTEAAEMLLELEE

Sequences:

>Translated_418_residues
MTRVEQIIRLVENGNVDKALALVPKVKKYGSDEEKYELADCLYAWGMPEEAKGLLEELAARYPDDGDIRLFLAEVYTELE
AEDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSERKLRQAYKKAPDEPVVQFALAELYFSLGEYAKSVPFYEQV
QKSTREMAGVLLVERLAEALTRSGEFEAALPYYEEALNEKTDSRTLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLY
LYLAKAYEQEGQLRKSYETALEGIKIDEWNKELRLYIGKLALKLNKPAEAEEQLKKALEIDGGYIEALTVLSALWLHEQR
YEDVVALLERAMADGEYDPQFEWDLGRAKHRLEMYDDALNHYAEAYNFFKNNVDFLEEYGYFLIEEGNRAAAREIFQQIV
GLDPSHTEAAEMLLELEE
>Mature_417_residues
TRVEQIIRLVENGNVDKALALVPKVKKYGSDEEKYELADCLYAWGMPEEAKGLLEELAARYPDDGDIRLFLAEVYTELEA
EDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSERKLRQAYKKAPDEPVVQFALAELYFSLGEYAKSVPFYEQVQ
KSTREMAGVLLVERLAEALTRSGEFEAALPYYEEALNEKTDSRTLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLYL
YLAKAYEQEGQLRKSYETALEGIKIDEWNKELRLYIGKLALKLNKPAEAEEQLKKALEIDGGYIEALTVLSALWLHEQRY
EDVVALLERAMADGEYDPQFEWDLGRAKHRLEMYDDALNHYAEAYNFFKNNVDFLEEYGYFLIEEGNRAAAREIFQQIVG
LDPSHTEAAEMLLELEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 47798; Mature: 47667

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVEQIIRLVENGNVDKALALVPKVKKYGSDEEKYELADCLYAWGMPEEAKGLLEELAA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RYPDDGDIRLFLAEVYTELEAEDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSE
HCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHH
RKLRQAYKKAPDEPVVQFALAELYFSLGEYAKSVPFYEQVQKSTREMAGVLLVERLAEAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRSGEFEAALPYYEEALNEKTDSRTLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLY
HCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LYLAKAYEQEGQLRKSYETALEGIKIDEWNKELRLYIGKLALKLNKPAEAEEQLKKALEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
DGGYIEALTVLSALWLHEQRYEDVVALLERAMADGEYDPQFEWDLGRAKHRLEMYDDALN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
HYAEAYNFFKNNVDFLEEYGYFLIEEGNRAAAREIFQQIVGLDPSHTEAAEMLLELEE
HHHHHHHHHHCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TRVEQIIRLVENGNVDKALALVPKVKKYGSDEEKYELADCLYAWGMPEEAKGLLEELAA
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RYPDDGDIRLFLAEVYTELEAEDEALAILDEISEDDPQFVRACLLAADLYEMQGLTEVSE
HCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHH
RKLRQAYKKAPDEPVVQFALAELYFSLGEYAKSVPFYEQVQKSTREMAGVLLVERLAEAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRSGEFEAALPYYEEALNEKTDSRTLFAYGFTALQAGYAQTAIDKLSALKELDPDYAPLY
HCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LYLAKAYEQEGQLRKSYETALEGIKIDEWNKELRLYIGKLALKLNKPAEAEEQLKKALEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
DGGYIEALTVLSALWLHEQRYEDVVALLERAMADGEYDPQFEWDLGRAKHRLEMYDDALN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
HYAEAYNFFKNNVDFLEEYGYFLIEEGNRAAAREIFQQIVGLDPSHTEAAEMLLELEE
HHHHHHHHHHCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]