| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ypjA [H]
Identifier: 138895767
GI number: 138895767
Start: 2255394
End: 2255993
Strand: Reverse
Name: ypjA [H]
Synonym: GTNG_2123
Alternate gene names: 138895767
Gene position: 2255993-2255394 (Counterclockwise)
Preceding gene: 138895768
Following gene: 138895766
Centisome position: 63.54
GC content: 52.83
Gene sequence:
>600_bases ATGGCATGGCTTTATGCGATATTCGCTTCCCGGCCGGTTGTTTCGCTACTTTTGCTTGTGAATGCTGCCGGCACCGTTTA CGGCTATTATTGGTATCGTTATCAGTTGGCGGAAACACCGCCCTTGTTTTTGCCATTTGTGCCCGACAGTCCGACGGCGA GTCTTTTTTTTCTCATCGTTCTCGGCGCCTGGCTGCTCGGTCGGCAGACACCGCTGTTTGAAGCCCTTGCCCTTGTGACA CTTGTCAAATACGGGATTTGGGCGGTCGTCATGAACGTGCTCGTTTGGCGCGTCACCGGAACGCTTGACTGGGCAGGATG GATGCTCATCGTTTCCCATGGGGTCATGGCGGTCGAAGGCATGCTGTACGCTCCGCTTTACCGATTTCGTCCGGTTCATC TTGCTTTGGCAGCGGTTTGGACGCTGCATAACGATGTCATCGACTACGTATTTGGCATGATGCCACGTTATCATATGTTG GATCATTATGCTGATCAAATCGGTTATTTTACGTTTTGGCTCAGCATTGCCTCCATTGCTGTGGCGTATTGGCTTGGCAT CCGCACACGGCGACAGTCGTTCTCGCTTCCTCCCGCATAG
Upstream 100 bases:
>100_bases TCGCCGGCTTAAAAGCTGAATAATCGTTTCACACGAAAAAGCTGACTCGCGTTAGTCAGCTTTTTTCGTACCTACATTGA ATTGAGATGAGGTGCAAACG
Downstream 100 bases:
>100_bases CAGTGGAATAGGAGTAACAAGGGAGGAAAATTTGCCCTATCGCTTGATCGCAGTTGCTTGGTCTACTCTTGTCCACTCCT TCATACATTGTAGTAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVT LVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHML DHYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA
Sequences:
>Translated_199_residues MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVT LVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHML DHYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA >Mature_198_residues AWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVTL VKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLD HYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA
Specific function: Unknown
COG id: COG4347
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009845 [H]
Pfam domain/function: PF07187 DUF1405 [H]
EC number: NA
Molecular weight: Translated: 22732; Mature: 22601
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIV CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHHHHHH LGAWLLGRQTPLFEALALVTLVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH MLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLDHYADQIGYFTFWLSIASIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAYWLGIRTRRQSFSLPPA HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHHHHHH LGAWLLGRQTPLFEALALVTLVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH MLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLDHYADQIGYFTFWLSIASIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAYWLGIRTRRQSFSLPPA HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]