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The map label for this gene is qcrC [H]

Identifier: 138895768

GI number: 138895768

Start: 2256071

End: 2256835

Strand: Reverse

Name: qcrC [H]

Synonym: GTNG_2124

Alternate gene names: 138895768

Gene position: 2256835-2256071 (Counterclockwise)

Preceding gene: 138895769

Following gene: 138895767

Centisome position: 63.57

GC content: 52.16

Gene sequence:

>765_bases
ATGCATCGCGGAAAAGGAATGAAATTTGTCGGCGATTCCCGTATTCCCGCGGTACGAAAACCGAATATTCCAAAGGACTA
TTCAGAGTATCCCGGGAAAACGGAAGTGTTTTGGCCGAACTTCCTGTTAAAGGAATGGCTTGTCGGTTCGGTCTTTCTCG
TTGGCTTTTTATGTTTGACCGTCGCCCACCCGTCGCCGCTCGAGCGGATTGCCGACCCGACGGACACGACGTATATCCCG
CTGCCTGACTGGTATTTCTTATTCTTATACCAATTGCTCAAATATTCGTATGCGTCCGGTCCGTATACAGTCATCGGCGC
GATCGTCATGCCGGGGTTGGCGTTTGGCGCTTTGTTGCTGGCTCCGTTTTTGGATCGCGGTCCGGAGCGCCGTCCGTGGA
AGCGCCCGGTGGCGACAGGCATGATGCTTCTTACTCTTGCTGCGATCGTTTATTTGACATGGGAATCGGTCGTCACGCAC
GACTGGGAAAAAGCGGCTGAACAAGGGAAAATTCGTGCGGAAGTGGAAATTGATACGAACGCTGAAGGCTATAAAATCGC
TCAAGCCAATACGTGTACGTCATGCCACGGGGAAAACTTGTCCGGTGGTGCCGGTCCGTCGCTTGTTGGCACCGGCTTGA
CAGCAGAAGAGATTGCGAAGATCGCTAAAGAAGGGCAAGGAAGCATGCCGGGTGGCATTTTTAAAGGCACGGATGAAGAG
CTGCAAAAAATGGCGGAATTCATCGCCGGCTTAAAAGCTGAATAA

Upstream 100 bases:

>100_bases
CAGCGCACTTTTTAATGATTCGCAGACAAGGCATTTCCGGTCCGCTATGATCGGTCGGTTGGACGTTTTGAGGCGATAGA
AAAAAGGAGGGAATCACGCA

Downstream 100 bases:

>100_bases
TCGTTTCACACGAAAAAGCTGACTCGCGTTAGTCAGCTTTTTTCGTACCTACATTGAATTGAGATGAGGTGCAAACGATG
GCATGGCTTTATGCGATATT

Product: cytochrome C1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHRGKGMKFVGDSRIPAVRKPNIPKDYSEYPGKTEVFWPNFLLKEWLVGSVFLVGFLCLTVAHPSPLERIADPTDTTYIP
LPDWYFLFLYQLLKYSYASGPYTVIGAIVMPGLAFGALLLAPFLDRGPERRPWKRPVATGMMLLTLAAIVYLTWESVVTH
DWEKAAEQGKIRAEVEIDTNAEGYKIAQANTCTSCHGENLSGGAGPSLVGTGLTAEEIAKIAKEGQGSMPGGIFKGTDEE
LQKMAEFIAGLKAE

Sequences:

>Translated_254_residues
MHRGKGMKFVGDSRIPAVRKPNIPKDYSEYPGKTEVFWPNFLLKEWLVGSVFLVGFLCLTVAHPSPLERIADPTDTTYIP
LPDWYFLFLYQLLKYSYASGPYTVIGAIVMPGLAFGALLLAPFLDRGPERRPWKRPVATGMMLLTLAAIVYLTWESVVTH
DWEKAAEQGKIRAEVEIDTNAEGYKIAQANTCTSCHGENLSGGAGPSLVGTGLTAEEIAKIAKEGQGSMPGGIFKGTDEE
LQKMAEFIAGLKAE
>Mature_254_residues
MHRGKGMKFVGDSRIPAVRKPNIPKDYSEYPGKTEVFWPNFLLKEWLVGSVFLVGFLCLTVAHPSPLERIADPTDTTYIP
LPDWYFLFLYQLLKYSYASGPYTVIGAIVMPGLAFGALLLAPFLDRGPERRPWKRPVATGMMLLTLAAIVYLTWESVVTH
DWEKAAEQGKIRAEVEIDTNAEGYKIAQANTCTSCHGENLSGGAGPSLVGTGLTAEEIAKIAKEGQGSMPGGIFKGTDEE
LQKMAEFIAGLKAE

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR009056
- InterPro:   IPR012049 [H]

Pfam domain/function: PF00032 Cytochrom_B_C [H]

EC number: NA

Molecular weight: Translated: 27845; Mature: 27845

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS51007 CYTC ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGKGMKFVGDSRIPAVRKPNIPKDYSEYPGKTEVFWPNFLLKEWLVGSVFLVGFLCLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
VAHPSPLERIADPTDTTYIPLPDWYFLFLYQLLKYSYASGPYTVIGAIVMPGLAFGALLL
HCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGPERRPWKRPVATGMMLLTLAAIVYLTWESVVTHDWEKAAEQGKIRAEVEIDTN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
AEGYKIAQANTCTSCHGENLSGGAGPSLVGTGLTAEEIAKIAKEGQGSMPGGIFKGTDEE
CCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
LQKMAEFIAGLKAE
HHHHHHHHHCCCCC
>Mature Secondary Structure
MHRGKGMKFVGDSRIPAVRKPNIPKDYSEYPGKTEVFWPNFLLKEWLVGSVFLVGFLCLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
VAHPSPLERIADPTDTTYIPLPDWYFLFLYQLLKYSYASGPYTVIGAIVMPGLAFGALLL
HCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGPERRPWKRPVATGMMLLTLAAIVYLTWESVVTHDWEKAAEQGKIRAEVEIDTN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
AEGYKIAQANTCTSCHGENLSGGAGPSLVGTGLTAEEIAKIAKEGQGSMPGGIFKGTDEE
CCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
LQKMAEFIAGLKAE
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8647852 [H]