Click here to switch to the map view.

The map label for this gene is sdpI [H]

Identifier: 138895673

GI number: 138895673

Start: 2147212

End: 2147868

Strand: Reverse

Name: sdpI [H]

Synonym: GTNG_2029

Alternate gene names: 138895673

Gene position: 2147868-2147212 (Counterclockwise)

Preceding gene: 138895674

Following gene: 138895672

Centisome position: 60.5

GC content: 43.99

Gene sequence:

>657_bases
ATGATGAAGGTTAGCCGGCTGGCGATCGTGTTGACGGTTCTCGCTTATCTATTGAGTTTGGCTGCTCTTCCGTATTTGCC
GGATGAAGTGGCGATCCATTGGAATGCATCAGGGGAAGCCGATGGCTTCAGCAACAAATGGTTTGGCGCGCTTCTCCCAC
CCGTATTGATGACAGGTTTCATTATTTTGATGGGAGTGATGCCAAGATTTGACCCGAAAAAAGAAAACTATGCTAAATTC
TCACACGTATACAACATTTTCAATGTGGCGTTGATCGCTTTTTTTCTCATATTGCATATCGTAACACTCGCGTACAATCT
CGGCTTTTCGATCGATATGAGCTTGTTTGCGCCGCTTGGCATCGGCGGGCTGTTTCTTGTCATCGGAAATTATATGCCGA
AAATCAAACATAATTATTTTATCGGCATCCGCACGCCATGGACGATTGAGAGTGAGACGGTTTGGCACAAAACGCATCGC
CTTGGCGGAAAAGTGTTTATTGCGATGGGGATTTTGCTTATGTTAACGGGATTTTTGCCAGGGGAAGGGGAGATGAAGTT
TGTCTTTTTGATGCTCATCATAATTTTGGGTAATTTGTATTTAATCATTCAGTCGTTCATCTATTTTCGTCATGAACAGC
GCAAGCGTTCATCATAG

Upstream 100 bases:

>100_bases
ACCGGCGTGAAGGACAGTATATATACTACTCTCTGAACACGACGGTGTTTCAAGATTTGCTCCGTTGGTTTTACGATTTC
GTCGAAAAAGGGGGAGAGAA

Downstream 100 bases:

>100_bases
ATAGGAGGGGACTCATGGGGATTATAGGCGCAGTCACACAGCTTCTTGTGTCGTTGCTCGTTCCGCTCGGACTTGTATGG
TACGGGAGAAAAAAAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MMKVSRLAIVLTVLAYLLSLAALPYLPDEVAIHWNASGEADGFSNKWFGALLPPVLMTGFIILMGVMPRFDPKKENYAKF
SHVYNIFNVALIAFFLILHIVTLAYNLGFSIDMSLFAPLGIGGLFLVIGNYMPKIKHNYFIGIRTPWTIESETVWHKTHR
LGGKVFIAMGILLMLTGFLPGEGEMKFVFLMLIIILGNLYLIIQSFIYFRHEQRKRSS

Sequences:

>Translated_218_residues
MMKVSRLAIVLTVLAYLLSLAALPYLPDEVAIHWNASGEADGFSNKWFGALLPPVLMTGFIILMGVMPRFDPKKENYAKF
SHVYNIFNVALIAFFLILHIVTLAYNLGFSIDMSLFAPLGIGGLFLVIGNYMPKIKHNYFIGIRTPWTIESETVWHKTHR
LGGKVFIAMGILLMLTGFLPGEGEMKFVFLMLIIILGNLYLIIQSFIYFRHEQRKRSS
>Mature_218_residues
MMKVSRLAIVLTVLAYLLSLAALPYLPDEVAIHWNASGEADGFSNKWFGALLPPVLMTGFIILMGVMPRFDPKKENYAKF
SHVYNIFNVALIAFFLILHIVTLAYNLGFSIDMSLFAPLGIGGLFLVIGNYMPKIKHNYFIGIRTPWTIESETVWHKTHR
LGGKVFIAMGILLMLTGFLPGEGEMKFVFLMLIIILGNLYLIIQSFIYFRHEQRKRSS

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 24723; Mature: 24723

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKVSRLAIVLTVLAYLLSLAALPYLPDEVAIHWNASGEADGFSNKWFGALLPPVLMTGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
IILMGVMPRFDPKKENYAKFSHVYNIFNVALIAFFLILHIVTLAYNLGFSIDMSLFAPLG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
IGGLFLVIGNYMPKIKHNYFIGIRTPWTIESETVWHKTHRLGGKVFIAMGILLMLTGFLP
HHHHHHHHHHHCCCCCCCEEEEECCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
GEGEMKFVFLMLIIILGNLYLIIQSFIYFRHEQRKRSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKVSRLAIVLTVLAYLLSLAALPYLPDEVAIHWNASGEADGFSNKWFGALLPPVLMTGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
IILMGVMPRFDPKKENYAKFSHVYNIFNVALIAFFLILHIVTLAYNLGFSIDMSLFAPLG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
IGGLFLVIGNYMPKIKHNYFIGIRTPWTIESETVWHKTHRLGGKVFIAMGILLMLTGFLP
HHHHHHHHHHHCCCCCCCEEEEECCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
GEGEMKFVFLMLIIILGNLYLIIQSFIYFRHEQRKRSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]