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The map label for this gene is yfiH [H]

Identifier: 138895657

GI number: 138895657

Start: 2130724

End: 2131695

Strand: Reverse

Name: yfiH [H]

Synonym: GTNG_2013

Alternate gene names: 138895657

Gene position: 2131695-2130724 (Counterclockwise)

Preceding gene: 138895658

Following gene: 138895653

Centisome position: 60.04

GC content: 52.57

Gene sequence:

>972_bases
ATGAAACTAGGCGTATTTACCGTTCTGTATCAACAGTTGCCGTTTGAAGAAATGCTCGATAAGATTGCTGCGATGGGCAT
TGAAGCCGTCGAGCTTGGTACCGGTAATTACCCGGGCAACGCTCATTGCGATCCGGATGCACTGTTAGATCAGCCGGAAA
AAATCAAAGCATTGAAAAAAGCGGTTCACGACCGTGGGCTTATCATTAGTGCGCTCAGCTGCCACGGCAACCCGCTCCAT
CCGGACAAAACGTTTGCGAAGCAATCGCATGACACATGGCGGAAAACAGTGAAACTCGCCGAGCAGCTCGAAGTCCCGGT
CATCAACGCCTTCTCGGGCTGCCCGGGCGACCATCCTGGCGCCAAGTATCCGAACTGGGTCACGTGCTCCTGGCCGCCGG
ATTACTTGGAAATTTTAAAATGGCAATGGGACGAAGTCGTCATCCCGTACTGGCGTGAAGAAGCAGAGTTCGCCAAAGCG
CACGGCATTCATCAAATCGCTTTTGAAATGCATCCGGGCTTTGTCGTCTACAACCCGGAAACGCTCCTCAAACTGCGTGA
ACACGCCGGCGAAACGATCGGTGCCAACTTCGACCCGAGCCATCTCCTTTGGCAAGGCATCGACCCAGTCGAAGCGATCA
AATTGCTTGGCCGTGAAAAAGCGATTTTCCACGTCCATGCGAAAGACACGTACTTGGACAAAGCGAACATTCGCAAAAAC
GGTGTGCTGGATACGAAACATTACAGCCAAATTCTCGATCGCTCATGGGTATTCCGCACCGTCGGCTACGGTCAAAGCGA
AAAATGTTGGCGCGACATCGTCAGCGCTCTGCGCGCGGTCGGCTATGACTATGTGCTCTCGATCGAGCATGAAGACATGC
TTGCCTCGATCGATGAAGGGCTGTCCCAAGCCGTGACGCTCTTGAAAAATGTGTTGTTCAAAGAAGAACTGCCTGAGATG
TGGTGGGCATAA

Upstream 100 bases:

>100_bases
GCCAACACGGGCGCTAACAGCGCCGTCAAAATAAAATGGAGCGGTGAGGCCGGTTGCTGATTGACCGGCCTTACACCGGC
GAGAAGGGGGAGAAAAACAA

Downstream 100 bases:

>100_bases
GAAAACAAAGGCGGCAAAGAGAGGAGCTTCTCTTTGCCGCCTATATTGTTTCTTTAAAAGTCCAGCATCCACTAGCTGGT
CGATTGTTCCCGCTTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKLGVFTVLYQQLPFEEMLDKIAAMGIEAVELGTGNYPGNAHCDPDALLDQPEKIKALKKAVHDRGLIISALSCHGNPLH
PDKTFAKQSHDTWRKTVKLAEQLEVPVINAFSGCPGDHPGAKYPNWVTCSWPPDYLEILKWQWDEVVIPYWREEAEFAKA
HGIHQIAFEMHPGFVVYNPETLLKLREHAGETIGANFDPSHLLWQGIDPVEAIKLLGREKAIFHVHAKDTYLDKANIRKN
GVLDTKHYSQILDRSWVFRTVGYGQSEKCWRDIVSALRAVGYDYVLSIEHEDMLASIDEGLSQAVTLLKNVLFKEELPEM
WWA

Sequences:

>Translated_323_residues
MKLGVFTVLYQQLPFEEMLDKIAAMGIEAVELGTGNYPGNAHCDPDALLDQPEKIKALKKAVHDRGLIISALSCHGNPLH
PDKTFAKQSHDTWRKTVKLAEQLEVPVINAFSGCPGDHPGAKYPNWVTCSWPPDYLEILKWQWDEVVIPYWREEAEFAKA
HGIHQIAFEMHPGFVVYNPETLLKLREHAGETIGANFDPSHLLWQGIDPVEAIKLLGREKAIFHVHAKDTYLDKANIRKN
GVLDTKHYSQILDRSWVFRTVGYGQSEKCWRDIVSALRAVGYDYVLSIEHEDMLASIDEGLSQAVTLLKNVLFKEELPEM
WWA
>Mature_323_residues
MKLGVFTVLYQQLPFEEMLDKIAAMGIEAVELGTGNYPGNAHCDPDALLDQPEKIKALKKAVHDRGLIISALSCHGNPLH
PDKTFAKQSHDTWRKTVKLAEQLEVPVINAFSGCPGDHPGAKYPNWVTCSWPPDYLEILKWQWDEVVIPYWREEAEFAKA
HGIHQIAFEMHPGFVVYNPETLLKLREHAGETIGANFDPSHLLWQGIDPVEAIKLLGREKAIFHVHAKDTYLDKANIRKN
GVLDTKHYSQILDRSWVFRTVGYGQSEKCWRDIVSALRAVGYDYVLSIEHEDMLASIDEGLSQAVTLLKNVLFKEELPEM
WWA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 36706; Mature: 36706

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGVFTVLYQQLPFEEMLDKIAAMGIEAVELGTGNYPGNAHCDPDALLDQPEKIKALKK
CCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHH
AVHDRGLIISALSCHGNPLHPDKTFAKQSHDTWRKTVKLAEQLEVPVINAFSGCPGDHPG
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
AKYPNWVTCSWPPDYLEILKWQWDEVVIPYWREEAEFAKAHGIHQIAFEMHPGFVVYNPE
CCCCCEEEECCCHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHEEEEECCCEEEECHH
TLLKLREHAGETIGANFDPSHLLWQGIDPVEAIKLLGREKAIFHVHAKDTYLDKANIRKN
HHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
GVLDTKHYSQILDRSWVFRTVGYGQSEKCWRDIVSALRAVGYDYVLSIEHEDMLASIDEG
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
LSQAVTLLKNVLFKEELPEMWWA
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLGVFTVLYQQLPFEEMLDKIAAMGIEAVELGTGNYPGNAHCDPDALLDQPEKIKALKK
CCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHH
AVHDRGLIISALSCHGNPLHPDKTFAKQSHDTWRKTVKLAEQLEVPVINAFSGCPGDHPG
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
AKYPNWVTCSWPPDYLEILKWQWDEVVIPYWREEAEFAKAHGIHQIAFEMHPGFVVYNPE
CCCCCEEEECCCHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHEEEEECCCEEEECHH
TLLKLREHAGETIGANFDPSHLLWQGIDPVEAIKLLGREKAIFHVHAKDTYLDKANIRKN
HHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
GVLDTKHYSQILDRSWVFRTVGYGQSEKCWRDIVSALRAVGYDYVLSIEHEDMLASIDEG
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
LSQAVTLLKNVLFKEELPEMWWA
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]