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The map label for this gene is ycjS [C]

Identifier: 138895658

GI number: 138895658

Start: 2131816

End: 2132970

Strand: Reverse

Name: ycjS [C]

Synonym: GTNG_2014

Alternate gene names: 138895658

Gene position: 2132970-2131816 (Counterclockwise)

Preceding gene: 138895659

Following gene: 138895657

Centisome position: 60.08

GC content: 56.8

Gene sequence:

>1155_bases
ATGAAATCGATCAATGTTGGCATCATCGGCACCGGTTTTTCCGCTTCATCTCATATTGAGGCGCTCCGCCGCCTGCCGTT
CGTGAACATTGTCGCCATCGCTTCAAGCAGCCAAGAAAAAGCAGAGGCAGCCGCGCGCCGGTTCGGGATTCCGAAAGCAT
ACGGCGACTATGAGGCGCTGATCGCCAACCCGGACGTCGAAGCGGTTCACAACTGCACGCGCAACGTCTTGCATTTTCCG
ATCAACAAGGCCGTACTTGAAGCGGGAAAACATTTATTATCAGAAAAGCCGCTCGCGATGAACAGCGAACAGTCAATCGA
ACTGAAAAAGCTGGCTGAAAAAAGCCCGGGTTTAAGCGCTGTCTGCTTCAACTACCGCCACTACCCGCTCGTCGCCGAAG
CGAAAGAGCGGATCGCCCGCGACGCAAAGCGCATCCATTTCGTCTATGGCGGCTATGTGCAAGATTGGTTGCTTTATGAC
ACTGATTACAACTGGCGGCTTGACCCAGCGCAAAACGGTCCGTCACGCGCCATCGCCGACATCGGCTCACACTGGTGCGA
CACAGTGCAATACGTGCTCGGAAAACGCATCGTCGAAGTGTTCGCCGATTTGCGCACCGTCCATCCAGTCCGCTACAAAC
CGAAGCAGGAAGGGAGCACGTTTACATCCGGGCATGCTCAAGACGCCGAACCGGTTCAGATTGATACGGAAGACGGCGGC
AGTGTGCTCGTCCATTTTGATGATGGCACTCATGGCGCGTTTACGATTTCCCAAGTGAGCGCCGGCCGGAAAAACCGGCT
CTATTTTGAAATCGCTACCGATGCGATGACGCTCGCTTGGGACCAAGAGCACCCGAACCGCCTCTGGATTGGGCGCCGCA
ACGGCCCGAACGAAGAAGTCGTCCGTGACCCGTCGCTCTTGTCGCCGCAAGCCGCCGCGCTCGCCCATTACCCAGGCGGT
CATGAAGAAGGCTGGCCGGATGGGCTGAAAAACTTGTTCCTCGACTTTTACAATGCCATCATCCGGAAACAGCGCGGCGA
GGCGCTCGGGGAGCTGCCGTTTGCGACGATCGCCGACGGCCACTATACGATGACGATCGTTGACGCCATTTTGGAAAGCC
ATCGCACGAAACAGTGGGTGCGGGTGGCGGAATAA

Upstream 100 bases:

>100_bases
ACGCGGTTCGTTGGGCCGCACCGGTCAACCGTGGGGAAATCATATTCGGCAACGTCAAACCGCTTGAACCGATTAAAGCG
AAACAAGGGGGAGCAGCGCG

Downstream 100 bases:

>100_bases
ACAGTTTTTGTTCGGCCGCTGCCAACACGGGCGCTAACAGCGCCGTCAAAATAAAATGGAGCGGTGAGGCCGGTTGCTGA
TTGACCGGCCTTACACCGGC

Product: putative oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKSINVGIIGTGFSASSHIEALRRLPFVNIVAIASSSQEKAEAAARRFGIPKAYGDYEALIANPDVEAVHNCTRNVLHFP
INKAVLEAGKHLLSEKPLAMNSEQSIELKKLAEKSPGLSAVCFNYRHYPLVAEAKERIARDAKRIHFVYGGYVQDWLLYD
TDYNWRLDPAQNGPSRAIADIGSHWCDTVQYVLGKRIVEVFADLRTVHPVRYKPKQEGSTFTSGHAQDAEPVQIDTEDGG
SVLVHFDDGTHGAFTISQVSAGRKNRLYFEIATDAMTLAWDQEHPNRLWIGRRNGPNEEVVRDPSLLSPQAAALAHYPGG
HEEGWPDGLKNLFLDFYNAIIRKQRGEALGELPFATIADGHYTMTIVDAILESHRTKQWVRVAE

Sequences:

>Translated_384_residues
MKSINVGIIGTGFSASSHIEALRRLPFVNIVAIASSSQEKAEAAARRFGIPKAYGDYEALIANPDVEAVHNCTRNVLHFP
INKAVLEAGKHLLSEKPLAMNSEQSIELKKLAEKSPGLSAVCFNYRHYPLVAEAKERIARDAKRIHFVYGGYVQDWLLYD
TDYNWRLDPAQNGPSRAIADIGSHWCDTVQYVLGKRIVEVFADLRTVHPVRYKPKQEGSTFTSGHAQDAEPVQIDTEDGG
SVLVHFDDGTHGAFTISQVSAGRKNRLYFEIATDAMTLAWDQEHPNRLWIGRRNGPNEEVVRDPSLLSPQAAALAHYPGG
HEEGWPDGLKNLFLDFYNAIIRKQRGEALGELPFATIADGHYTMTIVDAILESHRTKQWVRVAE
>Mature_384_residues
MKSINVGIIGTGFSASSHIEALRRLPFVNIVAIASSSQEKAEAAARRFGIPKAYGDYEALIANPDVEAVHNCTRNVLHFP
INKAVLEAGKHLLSEKPLAMNSEQSIELKKLAEKSPGLSAVCFNYRHYPLVAEAKERIARDAKRIHFVYGGYVQDWLLYD
TDYNWRLDPAQNGPSRAIADIGSHWCDTVQYVLGKRIVEVFADLRTVHPVRYKPKQEGSTFTSGHAQDAEPVQIDTEDGG
SVLVHFDDGTHGAFTISQVSAGRKNRLYFEIATDAMTLAWDQEHPNRLWIGRRNGPNEEVVRDPSLLSPQAAALAHYPGG
HEEGWPDGLKNLFLDFYNAIIRKQRGEALGELPFATIADGHYTMTIVDAILESHRTKQWVRVAE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=255, Percent_Identity=25.4901960784314, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=203, Percent_Identity=29.064039408867, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581117, Length=140, Percent_Identity=33.5714285714286, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42781; Mature: 42781

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSINVGIIGTGFSASSHIEALRRLPFVNIVAIASSSQEKAEAAARRFGIPKAYGDYEAL
CCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEE
IANPDVEAVHNCTRNVLHFPINKAVLEAGKHLLSEKPLAMNSEQSIELKKLAEKSPGLSA
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEE
VCFNYRHYPLVAEAKERIARDAKRIHFVYGGYVQDWLLYDTDYNWRLDPAQNGPSRAIAD
EEECCCCCCCHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCEEECCCCCCCHHHHHH
IGSHWCDTVQYVLGKRIVEVFADLRTVHPVRYKPKQEGSTFTSGHAQDAEPVQIDTEDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
SVLVHFDDGTHGAFTISQVSAGRKNRLYFEIATDAMTLAWDQEHPNRLWIGRRNGPNEEV
EEEEEEECCCCCEEEEHHHCCCCCCEEEEEEECCEEEEEECCCCCCEEEEECCCCCCHHH
VRDPSLLSPQAAALAHYPGGHEEGWPDGLKNLFLDFYNAIIRKQRGEALGELPFATIADG
HCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCC
HYTMTIVDAILESHRTKQWVRVAE
CCHHHHHHHHHHHHCCHHHHEECC
>Mature Secondary Structure
MKSINVGIIGTGFSASSHIEALRRLPFVNIVAIASSSQEKAEAAARRFGIPKAYGDYEAL
CCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEE
IANPDVEAVHNCTRNVLHFPINKAVLEAGKHLLSEKPLAMNSEQSIELKKLAEKSPGLSA
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEE
VCFNYRHYPLVAEAKERIARDAKRIHFVYGGYVQDWLLYDTDYNWRLDPAQNGPSRAIAD
EEECCCCCCCHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCEEECCCCCCCHHHHHH
IGSHWCDTVQYVLGKRIVEVFADLRTVHPVRYKPKQEGSTFTSGHAQDAEPVQIDTEDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
SVLVHFDDGTHGAFTISQVSAGRKNRLYFEIATDAMTLAWDQEHPNRLWIGRRNGPNEEV
EEEEEEECCCCCEEEEHHHCCCCCCEEEEEEECCEEEEEECCCCCCEEEEECCCCCCHHH
VRDPSLLSPQAAALAHYPGGHEEGWPDGLKNLFLDFYNAIIRKQRGEALGELPFATIADG
HCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCC
HYTMTIVDAILESHRTKQWVRVAE
CCHHHHHHHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]