Click here to switch to the map view.

The map label for this gene is 138895644

Identifier: 138895644

GI number: 138895644

Start: 2116515

End: 2117975

Strand: Reverse

Name: 138895644

Synonym: GTNG_2000

Alternate gene names: NA

Gene position: 2117975-2116515 (Counterclockwise)

Preceding gene: 138895646

Following gene: 138895643

Centisome position: 59.66

GC content: 38.6

Gene sequence:

>1461_bases
TTGAGGATAGCCATTGGTGGAATTAGTCATGAAACGAACACATTTTCTTTTGTTAAAACCACATTAGATCACTTTAGACA
ATCAGAATGGGAATTTGGCGAAGAAATTATTAAAAATCACACGGGAGTAAGGGACTTTTTGGGAGGGATTATTTCCGAAG
CGAAAAAACATTCTATTGAACTATTGCCTACTTTTTGGGCAAAAGCTGACCCGTCTGGAATTATTACGCGTGATGCATAC
AATCAGCTTGTTGAGAATTTGGTTGTGCGTATCAAACAAGCGGGCCCCTTGGATGGCGTATGTTTGGTCCTTCACGGTGG
AGGGATTGCTGAAGGAGTAGACGATATTGAAGGAGATATTCTATCAAATGTTAGGCAGGTTGTAGGACCTAAAATCCCTA
TCGTTGCTACGTTAGATTTACATGCCAATCTAACGAAAACGATGATCGAGGAAGCTGATGCATTATTCGGTGTGAATTTT
TATCCGCATATCGACTGCTATGAGAGAGGGAAAGAAGCGATTTCGAATTTGCTAAGAATAATAAAAGGTGACATTCACCC
AGTTATGCACATGGAAAAATTGCCGATGATGCTTTCATCATCGACAACAGATTTATCCCCCGCAAAAGATATTAATGAAA
TATGTTGGAAATGGGAAAAAGAGAAAAAAGTGATTGATTGTACATTTTTTCATGGATTTAGCCAAACGGATATACCTGAT
ATGCGGGTTAGTGTACTAACAATTACAGACAATGATAAGGAACTGGCTGAAAAAGCGGCAAAGAATGTTGCTGAGGAGGT
ATGGAAAAGGCGTTATGAGTTTTATGTGCGACATCCTAGCCCTATGGAAGCATTAAAATTAGCTTTAGAGGAACCAGAAG
GCCCGATTGTCATTAATGAAACTTCAGATAATCCTGGTGCAGGGACGCCAGGTGACGGTACACATTTGCTAAAAGCGATG
ATCGAAATAAATGCTCCACTTTCTTGTTTTGGTTTTATTTGTGATCCTGAAGTGGTAGAAAAAGCACATACAGTTGGAGT
AGGTCGTTTTATTGATATTCGATTGGGAGGAAAGACTGATTCGTATCATGGTGATCCTATAGAAACAACAGCTTATGTTA
AGTCGTTGACAGATGGCCGATTTATTCAAAGTTCACAAATGAATAAAGGGAAAAAGGTGAACTTAGGGAAATCAGCGCGC
CTCTGTATTGGAAATGTAGATGTGATTGTTTGTACGAAAAAAGGGCAAACACTAGATGAACAAGTTTTCTTGTTGCATGG
AATTGATGTGACTCAATACAAAATAGTCGCTTTAAAATCTGAAAACCACTTTCGCGCTTCTTTTGCTCCTATAGCAAAAA
AGATTATAACAGCGGATTCTCCAGGATTAAGCAGCTACGATCTTTGTCATTTTAATTATAAAAGAGTGATGAGACCTGTA
CTCCCATTAGATCATTTATGA

Upstream 100 bases:

>100_bases
TATTCAATTGAAATTGTGTATATAGTGCATAAAAAATATGCACATTTTACTTGTATGCAGAAATAAAGTGGTTTTGCTTT
AGGAAAGGAGATATAGGGCA

Downstream 100 bases:

>100_bases
TGTTTTTAAAGATCATTTAATTAGTAATCATTTTTTCGCTCCCCATATGGAATATGAAAATAGCAACTGAGGATGCGCTT
GTTTTCGCTCAGAAAAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRIAIGGISHETNTFSFVKTTLDHFRQSEWEFGEEIIKNHTGVRDFLGGIISEAKKHSIELLPTFWAKADPSGIITRDAY
NQLVENLVVRIKQAGPLDGVCLVLHGGGIAEGVDDIEGDILSNVRQVVGPKIPIVATLDLHANLTKTMIEEADALFGVNF
YPHIDCYERGKEAISNLLRIIKGDIHPVMHMEKLPMMLSSSTTDLSPAKDINEICWKWEKEKKVIDCTFFHGFSQTDIPD
MRVSVLTITDNDKELAEKAAKNVAEEVWKRRYEFYVRHPSPMEALKLALEEPEGPIVINETSDNPGAGTPGDGTHLLKAM
IEINAPLSCFGFICDPEVVEKAHTVGVGRFIDIRLGGKTDSYHGDPIETTAYVKSLTDGRFIQSSQMNKGKKVNLGKSAR
LCIGNVDVIVCTKKGQTLDEQVFLLHGIDVTQYKIVALKSENHFRASFAPIAKKIITADSPGLSSYDLCHFNYKRVMRPV
LPLDHL

Sequences:

>Translated_486_residues
MRIAIGGISHETNTFSFVKTTLDHFRQSEWEFGEEIIKNHTGVRDFLGGIISEAKKHSIELLPTFWAKADPSGIITRDAY
NQLVENLVVRIKQAGPLDGVCLVLHGGGIAEGVDDIEGDILSNVRQVVGPKIPIVATLDLHANLTKTMIEEADALFGVNF
YPHIDCYERGKEAISNLLRIIKGDIHPVMHMEKLPMMLSSSTTDLSPAKDINEICWKWEKEKKVIDCTFFHGFSQTDIPD
MRVSVLTITDNDKELAEKAAKNVAEEVWKRRYEFYVRHPSPMEALKLALEEPEGPIVINETSDNPGAGTPGDGTHLLKAM
IEINAPLSCFGFICDPEVVEKAHTVGVGRFIDIRLGGKTDSYHGDPIETTAYVKSLTDGRFIQSSQMNKGKKVNLGKSAR
LCIGNVDVIVCTKKGQTLDEQVFLLHGIDVTQYKIVALKSENHFRASFAPIAKKIITADSPGLSSYDLCHFNYKRVMRPV
LPLDHL
>Mature_486_residues
MRIAIGGISHETNTFSFVKTTLDHFRQSEWEFGEEIIKNHTGVRDFLGGIISEAKKHSIELLPTFWAKADPSGIITRDAY
NQLVENLVVRIKQAGPLDGVCLVLHGGGIAEGVDDIEGDILSNVRQVVGPKIPIVATLDLHANLTKTMIEEADALFGVNF
YPHIDCYERGKEAISNLLRIIKGDIHPVMHMEKLPMMLSSSTTDLSPAKDINEICWKWEKEKKVIDCTFFHGFSQTDIPD
MRVSVLTITDNDKELAEKAAKNVAEEVWKRRYEFYVRHPSPMEALKLALEEPEGPIVINETSDNPGAGTPGDGTHLLKAM
IEINAPLSCFGFICDPEVVEKAHTVGVGRFIDIRLGGKTDSYHGDPIETTAYVKSLTDGRFIQSSQMNKGKKVNLGKSAR
LCIGNVDVIVCTKKGQTLDEQVFLLHGIDVTQYKIVALKSENHFRASFAPIAKKIITADSPGLSSYDLCHFNYKRVMRPV
LPLDHL

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53990; Mature: 53990

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00785 5_NUCLEOTIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIGGISHETNTFSFVKTTLDHFRQSEWEFGEEIIKNHTGVRDFLGGIISEAKKHSIE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEE
LLPTFWAKADPSGIITRDAYNQLVENLVVRIKQAGPLDGVCLVLHGGGIAEGVDDIEGDI
EEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH
LSNVRQVVGPKIPIVATLDLHANLTKTMIEEADALFGVNFYPHIDCYERGKEAISNLLRI
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
IKGDIHPVMHMEKLPMMLSSSTTDLSPAKDINEICWKWEKEKKVIDCTFFHGFSQTDIPD
HHCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC
MRVSVLTITDNDKELAEKAAKNVAEEVWKRRYEFYVRHPSPMEALKLALEEPEGPIVINE
CEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCEEEEC
TSDNPGAGTPGDGTHLLKAMIEINAPLSCFGFICDPEVVEKAHTVGVGRFIDIRLGGKTD
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHCCCCEEEEEEECCCCC
SYHGDPIETTAYVKSLTDGRFIQSSQMNKGKKVNLGKSARLCIGNVDVIVCTKKGQTLDE
CCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCEEEECCCEEEEECCCCCCCCC
QVFLLHGIDVTQYKIVALKSENHFRASFAPIAKKIITADSPGLSSYDLCHFNYKRVMRPV
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHC
LPLDHL
CCCCCC
>Mature Secondary Structure
MRIAIGGISHETNTFSFVKTTLDHFRQSEWEFGEEIIKNHTGVRDFLGGIISEAKKHSIE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEE
LLPTFWAKADPSGIITRDAYNQLVENLVVRIKQAGPLDGVCLVLHGGGIAEGVDDIEGDI
EEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH
LSNVRQVVGPKIPIVATLDLHANLTKTMIEEADALFGVNFYPHIDCYERGKEAISNLLRI
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
IKGDIHPVMHMEKLPMMLSSSTTDLSPAKDINEICWKWEKEKKVIDCTFFHGFSQTDIPD
HHCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC
MRVSVLTITDNDKELAEKAAKNVAEEVWKRRYEFYVRHPSPMEALKLALEEPEGPIVINE
CEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCEEEEC
TSDNPGAGTPGDGTHLLKAMIEINAPLSCFGFICDPEVVEKAHTVGVGRFIDIRLGGKTD
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHCCCCEEEEEEECCCCC
SYHGDPIETTAYVKSLTDGRFIQSSQMNKGKKVNLGKSARLCIGNVDVIVCTKKGQTLDE
CCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCEEEECCCEEEEECCCCCCCCC
QVFLLHGIDVTQYKIVALKSENHFRASFAPIAKKIITADSPGLSSYDLCHFNYKRVMRPV
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHC
LPLDHL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA