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The map label for this gene is mcp1 [H]

Identifier: 138895646

GI number: 138895646

Start: 2119497

End: 2120960

Strand: Reverse

Name: mcp1 [H]

Synonym: GTNG_2002

Alternate gene names: 138895646

Gene position: 2120960-2119497 (Counterclockwise)

Preceding gene: 138895647

Following gene: 138895644

Centisome position: 59.74

GC content: 37.36

Gene sequence:

>1464_bases
ATGAATTACGAACTTTTGAGAAAGAGAAATAATTGGGTAGCCTTTGTTTTTGGGGGAACCGTTCTCATCCTTCAGGTGCT
CAACCTTATTTTAGGGATTCCTTGGAATTTTGTTTTGACGATCGTGGGAATCGTAGGAGGGGTGCTTGGGGCTGCAACGT
TTATTGCTAATAAAACGAAACGGAAAGAACAATTAGCTGTTCCTATGAAGTATTTTAACCTTGTGACTATTGGAGGGTTC
TGGTTTCTTGTTTTAACTTTAGACCCTCACATCATTAACATAATGGCCATGTTTTTCTTTGTTACAGTTATGGGAATCTA
TCAAGACAAGATCATTAATACGCTAACCATTGTGATTGTACTGATCATTCTGACTTATTTCTTTTTCACAAATGGAGAAG
TCATTTTTCACTCGACAAGCTATACCGACTTGCTTTACTACATGCTTATGTTTATCTTTGTTTCTATTGCTTGTTTTATG
CAATCTGCGTTTAATAGTAACTTGCAAAAAGAAGTGGAGATCCAAAAAGAAGAAGCCATTCGTGCCAAAGAATCTATGGA
GGATATATTGGAGCGGGTAAGGGATTCGCTTGCATCTGTAAAAGAATATCAAGAGAATTTCAAAAGAACGACAGATCGAA
TAAATATCCAGTCAACGGAAATTATCGACTCCATTAAAAATATTGCCTCATCTTTTGACATCCAAACTTTGCAATCCAAT
GAATTGGTTGCAGGAATGACGGAAACGAATGAGCAAGTAGACGACATGACAAAATTCATGGACGAAATCAACGAATATCT
TGAATCTACACAGGGGGCAATCAAGGAAAGCGGAAAACGAGTCGATGTTTTGGAAAAAGATTTAGAGTTTTTTAATAAAA
ATATTCAAAAAACGATTGATTATATGCAACAACTTCATGCTGAAACAGAAAATATTAAAAAAATTATCGAGACCATTTCT
GATATTTCTGCGCAAACGAATCTGTTAGCACTTAACGCCTCCATAGAAGCTGCTCGTGCGGGAGAACATGGGAAGGGATT
TGCGGTGGTAGCCGATGAAGTGAGGAAGCTCGCCGAATCCTCTAAAGAATCGTCGGAATCGATTGCTAAACTTCTTACGG
CGTTTAAAGAACGAATTTCTTTAGCTTCTCATACGATTTCTGAATCGCAATCATCGATTGAGAAAAACAGAACAAGCATG
CAGGAAGTGAAAGACATCTTTAAAGATGTCGAATCGAATATTCATCAATTCTCGGACAAAACAACCAATCTTCAAGAGTT
TATCCTATCAGTGCAAGCCATGATGCAAGAAGTAGAAGCCAAAGCAGAAAATAGTGTATCAATCACAAATAATAATAAGC
AAAGCCTTCAAGACGTATTAGAGCGTGTATCTTCTCAGCATGAGGAGATTGTTTCGTTATCGGACGGATTGAAAAACATA
GAGGAAAAGCTCCAAATCAGTTGA

Upstream 100 bases:

>100_bases
CAGCTCTTATGCATTTGAAAGAAGTTTATGACCATCTGGATGATAAAAAATATTCTTGGTACAAGGAACCGCTGGAATTA
AAAGAGGGGGCAATGGCGCG

Downstream 100 bases:

>100_bases
TTGAACGCTCTGTTGGGGATTCCAACAGAGCGTCTTTATGAAAAAGATATAAACATCCCCGTGGCGCTAGTAGAGTTTTA
AGTCATTCGAACGACTGATC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNYELLRKRNNWVAFVFGGTVLILQVLNLILGIPWNFVLTIVGIVGGVLGAATFIANKTKRKEQLAVPMKYFNLVTIGGF
WFLVLTLDPHIINIMAMFFFVTVMGIYQDKIINTLTIVIVLIILTYFFFTNGEVIFHSTSYTDLLYYMLMFIFVSIACFM
QSAFNSNLQKEVEIQKEEAIRAKESMEDILERVRDSLASVKEYQENFKRTTDRINIQSTEIIDSIKNIASSFDIQTLQSN
ELVAGMTETNEQVDDMTKFMDEINEYLESTQGAIKESGKRVDVLEKDLEFFNKNIQKTIDYMQQLHAETENIKKIIETIS
DISAQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAESSKESSESIAKLLTAFKERISLASHTISESQSSIEKNRTSM
QEVKDIFKDVESNIHQFSDKTTNLQEFILSVQAMMQEVEAKAENSVSITNNNKQSLQDVLERVSSQHEEIVSLSDGLKNI
EEKLQIS

Sequences:

>Translated_487_residues
MNYELLRKRNNWVAFVFGGTVLILQVLNLILGIPWNFVLTIVGIVGGVLGAATFIANKTKRKEQLAVPMKYFNLVTIGGF
WFLVLTLDPHIINIMAMFFFVTVMGIYQDKIINTLTIVIVLIILTYFFFTNGEVIFHSTSYTDLLYYMLMFIFVSIACFM
QSAFNSNLQKEVEIQKEEAIRAKESMEDILERVRDSLASVKEYQENFKRTTDRINIQSTEIIDSIKNIASSFDIQTLQSN
ELVAGMTETNEQVDDMTKFMDEINEYLESTQGAIKESGKRVDVLEKDLEFFNKNIQKTIDYMQQLHAETENIKKIIETIS
DISAQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAESSKESSESIAKLLTAFKERISLASHTISESQSSIEKNRTSM
QEVKDIFKDVESNIHQFSDKTTNLQEFILSVQAMMQEVEAKAENSVSITNNNKQSLQDVLERVSSQHEEIVSLSDGLKNI
EEKLQIS
>Mature_487_residues
MNYELLRKRNNWVAFVFGGTVLILQVLNLILGIPWNFVLTIVGIVGGVLGAATFIANKTKRKEQLAVPMKYFNLVTIGGF
WFLVLTLDPHIINIMAMFFFVTVMGIYQDKIINTLTIVIVLIILTYFFFTNGEVIFHSTSYTDLLYYMLMFIFVSIACFM
QSAFNSNLQKEVEIQKEEAIRAKESMEDILERVRDSLASVKEYQENFKRTTDRINIQSTEIIDSIKNIASSFDIQTLQSN
ELVAGMTETNEQVDDMTKFMDEINEYLESTQGAIKESGKRVDVLEKDLEFFNKNIQKTIDYMQQLHAETENIKKIIETIS
DISAQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAESSKESSESIAKLLTAFKERISLASHTISESQSSIEKNRTSM
QEVKDIFKDVESNIHQFSDKTTNLQEFILSVQAMMQEVEAKAENSVSITNNNKQSLQDVLERVSSQHEEIVSLSDGLKNI
EEKLQIS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=233, Percent_Identity=28.755364806867, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788194, Length=180, Percent_Identity=31.1111111111111, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788195, Length=199, Percent_Identity=27.1356783919598, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI2367378, Length=121, Percent_Identity=34.7107438016529, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787690, Length=158, Percent_Identity=32.2784810126582, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 55266; Mature: 55266

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYELLRKRNNWVAFVFGGTVLILQVLNLILGIPWNFVLTIVGIVGGVLGAATFIANKTK
CCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEQLAVPMKYFNLVTIGGFWFLVLTLDPHIINIMAMFFFVTVMGIYQDKIINTLTIVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILTYFFFTNGEVIFHSTSYTDLLYYMLMFIFVSIACFMQSAFNSNLQKEVEIQKEEAI
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RAKESMEDILERVRDSLASVKEYQENFKRTTDRINIQSTEIIDSIKNIASSFDIQTLQSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCC
ELVAGMTETNEQVDDMTKFMDEINEYLESTQGAIKESGKRVDVLEKDLEFFNKNIQKTID
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YMQQLHAETENIKKIIETISDISAQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAES
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHH
SKESSESIAKLLTAFKERISLASHTISESQSSIEKNRTSMQEVKDIFKDVESNIHQFSDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTNLQEFILSVQAMMQEVEAKAENSVSITNNNKQSLQDVLERVSSQHEEIVSLSDGLKNI
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKLQIS
HHHHCCC
>Mature Secondary Structure
MNYELLRKRNNWVAFVFGGTVLILQVLNLILGIPWNFVLTIVGIVGGVLGAATFIANKTK
CCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEQLAVPMKYFNLVTIGGFWFLVLTLDPHIINIMAMFFFVTVMGIYQDKIINTLTIVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILTYFFFTNGEVIFHSTSYTDLLYYMLMFIFVSIACFMQSAFNSNLQKEVEIQKEEAI
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RAKESMEDILERVRDSLASVKEYQENFKRTTDRINIQSTEIIDSIKNIASSFDIQTLQSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCC
ELVAGMTETNEQVDDMTKFMDEINEYLESTQGAIKESGKRVDVLEKDLEFFNKNIQKTID
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YMQQLHAETENIKKIIETISDISAQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAES
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHH
SKESSESIAKLLTAFKERISLASHTISESQSSIEKNRTSMQEVKDIFKDVESNIHQFSDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTNLQEFILSVQAMMQEVEAKAENSVSITNNNKQSLQDVLERVSSQHEEIVSLSDGLKNI
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKLQIS
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]