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The map label for this gene is yrkF [H]

Identifier: 138895626

GI number: 138895626

Start: 2100299

End: 2100868

Strand: Reverse

Name: yrkF [H]

Synonym: GTNG_1979

Alternate gene names: 138895626

Gene position: 2100868-2100299 (Counterclockwise)

Preceding gene: 138895627

Following gene: 138895625

Centisome position: 59.17

GC content: 51.23

Gene sequence:

>570_bases
ATGATCAAAGTGGATATGATTGTCGATGCGAAAGGACTGTCCTGTCCGATGCCGATTGTCCGCACGAAAAAGGCCATCGG
TGAGCTGCAGTCAGGCCAAGTACTGGAAGTGCAGGCGACGGATAAGGGGTCCAAGGCCGATATGAAAGCGTGGGCGGAAA
GCACAGGACATCAATATTTAGGGACGATTGAAGAAGATGGGGTGTTGAAACATTATATTCGCAAGTCAGCGGAACATGAA
ACACGTAACGAAGTGACATTCCCTCATGTCGTATCGAATGAACAACTGCAAGAAAAATTTCACGATCCGGATTCGTTCGT
CTTGGATGTCCGTGAACCGGCGGAGTATGCGTTCGGCCATATTCCGGGGGCGGTTTCGATTCCGCTCGGGGATCTTGACA
GCCGAATGGCAGAGCTTCCGAAAGACAAAACGATTTATGTCGTATGCCGCACAGGGACACGGAGCGATTTGGCCGCGCAA
AAGCTGGCTGAAAACGGATTTGACCGTGTGCGGAACGTCATTCCAGGCATGTCGCAGTGGAATGGGCCGCTTGATTCCGC
TCAATCATAA

Upstream 100 bases:

>100_bases
AGTTTCTTGACAGCCGTGGTTACCGCGTCGTCAACATGACAGGAGGCATGCTGGCCTGGGAAGGGCCTGTCGAATAAACC
ATAGGGAGGAAATCAGTCAA

Downstream 100 bases:

>100_bases
TTGAGCGGCCTTTTTTAACAAACTAATATACACTAGGGGGTATATAAACATGATGAAAGAAATGACTGTGCAACAAATGA
CGGAAAAGGTGTTAAACAAA

Product: molybdopterin biosynthesis MoeB protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIKVDMIVDAKGLSCPMPIVRTKKAIGELQSGQVLEVQATDKGSKADMKAWAESTGHQYLGTIEEDGVLKHYIRKSAEHE
TRNEVTFPHVVSNEQLQEKFHDPDSFVLDVREPAEYAFGHIPGAVSIPLGDLDSRMAELPKDKTIYVVCRTGTRSDLAAQ
KLAENGFDRVRNVIPGMSQWNGPLDSAQS

Sequences:

>Translated_189_residues
MIKVDMIVDAKGLSCPMPIVRTKKAIGELQSGQVLEVQATDKGSKADMKAWAESTGHQYLGTIEEDGVLKHYIRKSAEHE
TRNEVTFPHVVSNEQLQEKFHDPDSFVLDVREPAEYAFGHIPGAVSIPLGDLDSRMAELPKDKTIYVVCRTGTRSDLAAQ
KLAENGFDRVRNVIPGMSQWNGPLDSAQS
>Mature_189_residues
MIKVDMIVDAKGLSCPMPIVRTKKAIGELQSGQVLEVQATDKGSKADMKAWAESTGHQYLGTIEEDGVLKHYIRKSAEHE
TRNEVTFPHVVSNEQLQEKFHDPDSFVLDVREPAEYAFGHIPGAVSIPLGDLDSRMAELPKDKTIYVVCRTGTRSDLAAQ
KLAENGFDRVRNVIPGMSQWNGPLDSAQS

Specific function: Unknown. [C]

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 20877; Mature: 20877

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3 ; PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVDMIVDAKGLSCPMPIVRTKKAIGELQSGQVLEVQATDKGSKADMKAWAESTGHQYL
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEE
GTIEEDGVLKHYIRKSAEHETRNEVTFPHVVSNEQLQEKFHDPDSFVLDVREPAEYAFGH
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHCCCCCEEEECCCCHHHHHHC
IPGAVSIPLGDLDSRMAELPKDKTIYVVCRTGTRSDLAAQKLAENGFDRVRNVIPGMSQW
CCCEEECCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHC
NGPLDSAQS
CCCCCCCCC
>Mature Secondary Structure
MIKVDMIVDAKGLSCPMPIVRTKKAIGELQSGQVLEVQATDKGSKADMKAWAESTGHQYL
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEE
GTIEEDGVLKHYIRKSAEHETRNEVTFPHVVSNEQLQEKFHDPDSFVLDVREPAEYAFGH
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHCCCCCEEEECCCCHHHHHHC
IPGAVSIPLGDLDSRMAELPKDKTIYVVCRTGTRSDLAAQKLAENGFDRVRNVIPGMSQW
CCCEEECCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHC
NGPLDSAQS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]