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The map label for this gene is endR [H]

Identifier: 138895489

GI number: 138895489

Start: 1957706

End: 1958710

Strand: Reverse

Name: endR [H]

Synonym: GTNG_1837

Alternate gene names: 138895489

Gene position: 1958710-1957706 (Counterclockwise)

Preceding gene: 138895490

Following gene: 138895488

Centisome position: 55.17

GC content: 51.04

Gene sequence:

>1005_bases
TTGAAAAAAGTAACGATGGCTGATGTCGCGAAACTGGCCAACGTTTCCAAAAGCACGGTCTCGCAATATTTGAATAAACG
CTATGAATATATGAGTGAAGAAACAAGAAAGCGCATTGCCCAGGCGATCGAAGAACTCGGCTACCAGCCGAACGTGATCG
CCCGCAGTTTGAAGCAAAAGACAACAGCGACGATCGGCGTCATTGTGTTTAATATGCTTCATATGTTGACGACGCAAGTG
CTACACGCTATTGAAGAAGAATGCCAAAAGCGTGAGTTTCAAGTGATCGTCTGCAACTCCGGCGATGACCCGGAAAAAGA
GAGAAAATATATCGATATGCTGCTCGCGAAACAAGTGGACGGGTTGATCGTCTTTCCGACGGGAAAAAACGAAGACGTTT
ACCATCGCCTTGTCGCCGAGCGGTTTCCGATCGTCTTTGTCGACCGGATGGTGCCGGGGGTTGAGGCCGATAGTGTGCTG
TTGGACAACTTTGGTGCGGCAGAGATGGCGGTTGATTATTTGGCCGCCCATGGTTATGACCGTATCGCTATTGTCACTCC
GCCGCTTGTCGCCCACAACGTGCCGCGGATGGAACGGCTTCAAGGGTTTCGGATGGCGATGGAAAAAAGAGGCCTTAAAG
TTGATGATAGGAGTGTGATCGCTGCCGAGGCCGCCGAGCTGCCTGGGGAATTGCAAAAGCGGTTCGCTGCCCCTGAACGG
CCGAACGCGTTGTTTGCAATTAACGACTTAACATTAATGGGCATTTTACGGTTCGTGAAAGAAACTGGCATTCGCGTGCC
GGATGAGTTAGGACTGATTAGCATTGATGATGTGCCATTTGCCGATATTTACACGCCGATGCTGACGACGATCGCCCAGC
CGACGTTTGCGATGGGGAAAAAAGCAGCTGAACGCGTGTTCGAGCAAATGGATCAGGAGCGAACGCGCAAACCGCGTGTG
TTTCGTTTCTCCCCGACATTGGTGGAACGGACATCGATCAGATGA

Upstream 100 bases:

>100_bases
AAATAGTTGTAAACCGCTTTCACTTGTTTTATAATAAAGCTAAACCGGTTTATGAAAGCGCTTTTGAACTAAATCGATTT
AGTACAAGAGAGGGATTCTG

Downstream 100 bases:

>100_bases
GAAAGCAGATAAGGAGGGAGGAGAAACGATGGCGATTTCTGAGGATGTTGTCATTGGCATTGATATTGGAACGACAAGCA
CGAAAGCGGTTGTTTTCGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAQAIEELGYQPNVIARSLKQKTTATIGVIVFNMLHMLTTQV
LHAIEEECQKREFQVIVCNSGDDPEKERKYIDMLLAKQVDGLIVFPTGKNEDVYHRLVAERFPIVFVDRMVPGVEADSVL
LDNFGAAEMAVDYLAAHGYDRIAIVTPPLVAHNVPRMERLQGFRMAMEKRGLKVDDRSVIAAEAAELPGELQKRFAAPER
PNALFAINDLTLMGILRFVKETGIRVPDELGLISIDDVPFADIYTPMLTTIAQPTFAMGKKAAERVFEQMDQERTRKPRV
FRFSPTLVERTSIR

Sequences:

>Translated_334_residues
MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAQAIEELGYQPNVIARSLKQKTTATIGVIVFNMLHMLTTQV
LHAIEEECQKREFQVIVCNSGDDPEKERKYIDMLLAKQVDGLIVFPTGKNEDVYHRLVAERFPIVFVDRMVPGVEADSVL
LDNFGAAEMAVDYLAAHGYDRIAIVTPPLVAHNVPRMERLQGFRMAMEKRGLKVDDRSVIAAEAAELPGELQKRFAAPER
PNALFAINDLTLMGILRFVKETGIRVPDELGLISIDDVPFADIYTPMLTTIAQPTFAMGKKAAERVFEQMDQERTRKPRV
FRFSPTLVERTSIR
>Mature_334_residues
MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAQAIEELGYQPNVIARSLKQKTTATIGVIVFNMLHMLTTQV
LHAIEEECQKREFQVIVCNSGDDPEKERKYIDMLLAKQVDGLIVFPTGKNEDVYHRLVAERFPIVFVDRMVPGVEADSVL
LDNFGAAEMAVDYLAAHGYDRIAIVTPPLVAHNVPRMERLQGFRMAMEKRGLKVDDRSVIAAEAAELPGELQKRFAAPER
PNALFAINDLTLMGILRFVKETGIRVPDELGLISIDDVPFADIYTPMLTTIAQPTFAMGKKAAERVFEQMDQERTRKPRV
FRFSPTLVERTSIR

Specific function: Putative repressor of the endoglucanase operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787948, Length=333, Percent_Identity=33.6336336336336, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI1790194, Length=334, Percent_Identity=31.1377245508982, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1790369, Length=309, Percent_Identity=30.0970873786408, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788474, Length=335, Percent_Identity=30.7462686567164, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1789068, Length=340, Percent_Identity=28.8235294117647, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1789202, Length=333, Percent_Identity=30.6306306306306, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787580, Length=313, Percent_Identity=30.6709265175719, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786540, Length=324, Percent_Identity=27.4691358024691, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1786268, Length=333, Percent_Identity=25.2252252252252, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI48994940, Length=336, Percent_Identity=26.4880952380952, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787906, Length=331, Percent_Identity=26.2839879154079, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1790715, Length=321, Percent_Identity=23.98753894081, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789456, Length=336, Percent_Identity=26.4880952380952, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790689, Length=311, Percent_Identity=23.4726688102894, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37823; Mature: 37823

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAQAIEELGYQPNVIARSLKQK
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TTATIGVIVFNMLHMLTTQVLHAIEEECQKREFQVIVCNSGDDPEKERKYIDMLLAKQVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
GLIVFPTGKNEDVYHRLVAERFPIVFVDRMVPGVEADSVLLDNFGAAEMAVDYLAAHGYD
CEEEEECCCCHHHHHHHHHHHCCEEEEHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
RIAIVTPPLVAHNVPRMERLQGFRMAMEKRGLKVDDRSVIAAEAAELPGELQKRFAAPER
EEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCC
PNALFAINDLTLMGILRFVKETGIRVPDELGLISIDDVPFADIYTPMLTTIAQPTFAMGK
CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
KAAERVFEQMDQERTRKPRVFRFSPTLVERTSIR
HHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCC
>Mature Secondary Structure
MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAQAIEELGYQPNVIARSLKQK
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TTATIGVIVFNMLHMLTTQVLHAIEEECQKREFQVIVCNSGDDPEKERKYIDMLLAKQVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
GLIVFPTGKNEDVYHRLVAERFPIVFVDRMVPGVEADSVLLDNFGAAEMAVDYLAAHGYD
CEEEEECCCCHHHHHHHHHHHCCEEEEHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
RIAIVTPPLVAHNVPRMERLQGFRMAMEKRGLKVDDRSVIAAEAAELPGELQKRFAAPER
EEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCC
PNALFAINDLTLMGILRFVKETGIRVPDELGLISIDDVPFADIYTPMLTTIAQPTFAMGK
CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
KAAERVFEQMDQERTRKPRVFRFSPTLVERTSIR
HHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2307659; 1639817 [H]