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The map label for this gene is yjhC [C]

Identifier: 138895468

GI number: 138895468

Start: 1928048

End: 1929037

Strand: Reverse

Name: yjhC [C]

Synonym: GTNG_1816

Alternate gene names: 138895468

Gene position: 1929037-1928048 (Counterclockwise)

Preceding gene: 138895469

Following gene: 138895467

Centisome position: 54.33

GC content: 42.63

Gene sequence:

>990_bases
GTGAGAATACGTTGGGGGATATTGGGTGCGGCTAATATTGCGTACGACCAACTAGTACCTGCATTACGTCGTTCCAACCG
CGCCATAGTATCGGCTGTTGCTTCGAAAAGCAAGCGGAAGGTAGAACGGTTTCAAGTGCCGACCATCTATGAAAGCTATG
AAGAACTGTTACAATCTCCAACCATAGATGCCGTTTATATTCCGCTTCCAAATGCTCTCCATGCTGAATGGGCAATAAAG
GCGATGAATTGTGGAAAGCATGTTTTGCTAGAAAAACCTGCAGCGTTGACGGAGTCAGAGATGATAGAGATGAAGACGGC
GGCCGAGAAAAACGGGGTCGTCTTTATGGAAGCATTTATGTATCAATTTCATAGACAGCATAAACGCATGAAAGAGCTGC
TTGAATCAGGGATTATAGGAGAATATCGACATGTAAAAGCGCATTTTTCATGGATGTTGCGGGATCGCGAGGACATACGA
TTGAAGCCGGAACTGGGCGGGGGAGCCATGCGCGATGTTGGATGTTACGGATTGCATGTTGTCACCCAAATCGTCGGCCT
TAAGCCTATAAAGATTTCTATGTTTGGAAAGATTCATCCTGAATTCGGCGTTGATACTACATCAACTTGTACGTTGATTG
ATGAGAAAAATCACACAGCAGAGATTTCTGCTTCGATGGAGCTACCGTTTATCAATCGTTATGAAATTATCGGTTCGAAT
GGTTCGATCATTGTGGATTCCGCTTTCCGCCCCGACGTGTCAAATGATGGGTTTGGTAAGATTACCGTAAGAGATGAAAA
TAGTCATGTGATTTTCTTTGAAAGAATTAAGGATGATCAATATTTAAACCAGGTAGAACATTTTCACGATTGCATTCTCG
AAAACAAAGAGCCGATATACAATGCTAGTCACTCGTTAGAAATGGCTCTTTATTTGGAAAAAGGCTATCAGTCACTTGAA
AATCACTCGATAGTGATGGATGTGAAATAA

Upstream 100 bases:

>100_bases
AACACGGTTGCTTCCTCTTAAGTCTCAGACACTGCTTATAAGCACCTATATATGTGCTTATCAAAGACAACGCTATTACA
TAAACGGGAGGATAGATAGG

Downstream 100 bases:

>100_bases
AAATATAGAAAGCGCTTAATCTATCGTTAAAACGCATCACTTAGGAAAATAAAACTCACGTGTTACACGAGCTATTTACG
AGATCATTCTTTCTCGAAAA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRIRWGILGAANIAYDQLVPALRRSNRAIVSAVASKSKRKVERFQVPTIYESYEELLQSPTIDAVYIPLPNALHAEWAIK
AMNCGKHVLLEKPAALTESEMIEMKTAAEKNGVVFMEAFMYQFHRQHKRMKELLESGIIGEYRHVKAHFSWMLRDREDIR
LKPELGGGAMRDVGCYGLHVVTQIVGLKPIKISMFGKIHPEFGVDTTSTCTLIDEKNHTAEISASMELPFINRYEIIGSN
GSIIVDSAFRPDVSNDGFGKITVRDENSHVIFFERIKDDQYLNQVEHFHDCILENKEPIYNASHSLEMALYLEKGYQSLE
NHSIVMDVK

Sequences:

>Translated_329_residues
MRIRWGILGAANIAYDQLVPALRRSNRAIVSAVASKSKRKVERFQVPTIYESYEELLQSPTIDAVYIPLPNALHAEWAIK
AMNCGKHVLLEKPAALTESEMIEMKTAAEKNGVVFMEAFMYQFHRQHKRMKELLESGIIGEYRHVKAHFSWMLRDREDIR
LKPELGGGAMRDVGCYGLHVVTQIVGLKPIKISMFGKIHPEFGVDTTSTCTLIDEKNHTAEISASMELPFINRYEIIGSN
GSIIVDSAFRPDVSNDGFGKITVRDENSHVIFFERIKDDQYLNQVEHFHDCILENKEPIYNASHSLEMALYLEKGYQSLE
NHSIVMDVK
>Mature_329_residues
MRIRWGILGAANIAYDQLVPALRRSNRAIVSAVASKSKRKVERFQVPTIYESYEELLQSPTIDAVYIPLPNALHAEWAIK
AMNCGKHVLLEKPAALTESEMIEMKTAAEKNGVVFMEAFMYQFHRQHKRMKELLESGIIGEYRHVKAHFSWMLRDREDIR
LKPELGGGAMRDVGCYGLHVVTQIVGLKPIKISMFGKIHPEFGVDTTSTCTLIDEKNHTAEISASMELPFINRYEIIGSN
GSIIVDSAFRPDVSNDGFGKITVRDENSHVIFFERIKDDQYLNQVEHFHDCILENKEPIYNASHSLEMALYLEKGYQSLE
NHSIVMDVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=331, Percent_Identity=26.5861027190332, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI87082405, Length=295, Percent_Identity=23.728813559322, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787574, Length=202, Percent_Identity=24.2574257425743, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081947, Length=195, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693182, Length=253, Percent_Identity=24.5059288537549, Blast_Score=66, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=256, Percent_Identity=33.984375, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24584727, Length=254, Percent_Identity=27.9527559055118, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24581115, Length=196, Percent_Identity=29.5918367346939, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37486; Mature: 37486

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRWGILGAANIAYDQLVPALRRSNRAIVSAVASKSKRKVERFQVPTIYESYEELLQSP
CEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TIDAVYIPLPNALHAEWAIKAMNCGKHVLLEKPAALTESEMIEMKTAAEKNGVVFMEAFM
CCCEEEECCCCCCCHHHEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
YQFHRQHKRMKELLESGIIGEYRHVKAHFSWMLRDREDIRLKPELGGGAMRDVGCYGLHV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHH
VTQIVGLKPIKISMFGKIHPEFGVDTTSTCTLIDEKNHTAEISASMELPFINRYEIIGSN
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCC
GSIIVDSAFRPDVSNDGFGKITVRDENSHVIFFERIKDDQYLNQVEHFHDCILENKEPIY
CCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
NASHSLEMALYLEKGYQSLENHSIVMDVK
CCCCCEEEEEEEHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MRIRWGILGAANIAYDQLVPALRRSNRAIVSAVASKSKRKVERFQVPTIYESYEELLQSP
CEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TIDAVYIPLPNALHAEWAIKAMNCGKHVLLEKPAALTESEMIEMKTAAEKNGVVFMEAFM
CCCEEEECCCCCCCHHHEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
YQFHRQHKRMKELLESGIIGEYRHVKAHFSWMLRDREDIRLKPELGGGAMRDVGCYGLHV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHH
VTQIVGLKPIKISMFGKIHPEFGVDTTSTCTLIDEKNHTAEISASMELPFINRYEIIGSN
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCC
GSIIVDSAFRPDVSNDGFGKITVRDENSHVIFFERIKDDQYLNQVEHFHDCILENKEPIY
CCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
NASHSLEMALYLEKGYQSLENHSIVMDVK
CCCCCEEEEEEEHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]