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The map label for this gene is arsR [H]

Identifier: 138895256

GI number: 138895256

Start: 1686612

End: 1686959

Strand: Direct

Name: arsR [H]

Synonym: GTNG_1598

Alternate gene names: 138895256

Gene position: 1686612-1686959 (Clockwise)

Preceding gene: 138895255

Following gene: 138895257

Centisome position: 47.51

GC content: 37.36

Gene sequence:

>348_bases
GTGCAAAAGACAGTAGTGGAAATAGAAAAAGCCTCACATGCTTTAAAGTTACTTGGTGATAAAACACGTTTAACGATTAT
GGCAATTTTAAAACAACGTGAGTGTTGTGTATGCGAGCTTCTTGAGGTTTTTGACATGAGTCAGCCGTCTATTAGTCAGC
ATCTTCGCAAGTTAAAAGATGCAGGATTAGTAAAAGAGGATAGGAGGGGACAGTGGATTTATTATTCCCTCAATCCACAA
AATGAGTTATATGATTTCATCCAAGATATTCTGCAACATATTCCAGATCAAACAGAGAATATTCGTAAGATTGAGGAAAA
CAACCCTACGCTCCGTTGTGGTTGTTAA

Upstream 100 bases:

>100_bases
AACAAAATTGCAAATAAAGAAATTTAGGAGTATCATATTTCATTTCCGTTCATATATAAGTAAATAACTATATAATCATA
CAAGAATAGGAGGTGTTCCC

Downstream 100 bases:

>100_bases
CCTACTAATTAAATTGGGAGAGAAAAAATGAATAATACGGGGAAAAAACGTCTATCGTTCTTGGATCGATACCTAACGAT
TTGGATTTTCCTTGCTATGG

Product: transcriptional regulator ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MQKTVVEIEKASHALKLLGDKTRLTIMAILKQRECCVCELLEVFDMSQPSISQHLRKLKDAGLVKEDRRGQWIYYSLNPQ
NELYDFIQDILQHIPDQTENIRKIEENNPTLRCGC

Sequences:

>Translated_115_residues
MQKTVVEIEKASHALKLLGDKTRLTIMAILKQRECCVCELLEVFDMSQPSISQHLRKLKDAGLVKEDRRGQWIYYSLNPQ
NELYDFIQDILQHIPDQTENIRKIEENNPTLRCGC
>Mature_115_residues
MQKTVVEIEKASHALKLLGDKTRLTIMAILKQRECCVCELLEVFDMSQPSISQHLRKLKDAGLVKEDRRGQWIYYSLNPQ
NELYDFIQDILQHIPDQTENIRKIEENNPTLRCGC

Specific function: Metal-responsive transcriptional regulator that represses transcription of the aseR-ydfA operon by binding specifically to its promoter. Binding of arsenite or antimonite causes the repressor to dissociate from the DNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789916, Length=67, Percent_Identity=43.2835820895522, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13430; Mature: 13430

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00345 ETS_DOMAIN_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTVVEIEKASHALKLLGDKTRLTIMAILKQRECCVCELLEVFDMSQPSISQHLRKLKD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AGLVKEDRRGQWIYYSLNPQNELYDFIQDILQHIPDQTENIRKIEENNPTLRCGC
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MQKTVVEIEKASHALKLLGDKTRLTIMAILKQRECCVCELLEVFDMSQPSISQHLRKLKD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AGLVKEDRRGQWIYYSLNPQNELYDFIQDILQHIPDQTENIRKIEENNPTLRCGC
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]