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The map label for this gene is yliE [H]

Identifier: 138895215

GI number: 138895215

Start: 1638178

End: 1638888

Strand: Direct

Name: yliE [H]

Synonym: GTNG_1555

Alternate gene names: 138895215

Gene position: 1638178-1638888 (Clockwise)

Preceding gene: 138895214

Following gene: 138895216

Centisome position: 46.14

GC content: 43.04

Gene sequence:

>711_bases
GTGACTTTCATTCCTGTTCGGAGTGTAATCGACAAACAACTGTTTGAACATGTTTATCAGCCACTATGGAATTTAATGAA
CTGGAGCATTTTCGGGTATGAATCGTTGCTGCGGGTGAATGGGGTCAAAAATATCGAACAGTTTTTTCAAAAAGCCCGGG
AGGAAGGCTGTTTGTACGAGCTTGACCTTATATCATTAGAAAGCTCCATTTCGCAATTTCCTTTCTTGGAACAGAAAAGA
GGACTACTGTTTGTAAATGTGTACCCATCCACGATCTCGCGGCGAGAGTTTGCACAGTTGTTAAAAAAAATGGTTGAACG
TTTTCCATATATTAAAAACCGAATTGTGTTTGAGCTCAACGAAACAACAGAAGACGACGACAGATGGAAAGACGGCGAAC
TGAAGGCGGCTGTACAGTGGATCAGAGAGCACGGATTTTACATTGCAGTTGATGACGTTGGTAAAGGGGCCTCCACTTTA
CAAAAGATTATTGAACTACAGCCAGATTATATCAAATTAGACCGGTATTTCGCTCAAGGGCTAGCAGTCAACGTGGAAAA
GCAAAGAATGCTCAGCTTGCTAGTAAACTATTGCAGTCCTGTGCTCGTGTTAGAGGGCATTGAAAAGGAAGTGGATCTTG
CTCAGGCCAAGCTATTAAGAGTACCAGCAGCGCAAGGATATCTTTTAGGCAGGCCGGAACGGTTGACCTAA

Upstream 100 bases:

>100_bases
TAGTAAAAATTACACAAATAACTCATTTTTTCACAATGACTTTTGTGCTTAGTAACTTCTTTTAATAGGAAAAAAGAATT
ATAAAAGGAGTAGCAAAACG

Downstream 100 bases:

>100_bases
ACTACTGCGTATGGATGCACCGACATAGCTTTTTCCTCCTCCTCTTTTATTCGATTGACAAAAATAGGGAGATAGAAGTG
AGCGCATGTTCTCGAGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTFIPVRSVIDKQLFEHVYQPLWNLMNWSIFGYESLLRVNGVKNIEQFFQKAREEGCLYELDLISLESSISQFPFLEQKR
GLLFVNVYPSTISRREFAQLLKKMVERFPYIKNRIVFELNETTEDDDRWKDGELKAAVQWIREHGFYIAVDDVGKGASTL
QKIIELQPDYIKLDRYFAQGLAVNVEKQRMLSLLVNYCSPVLVLEGIEKEVDLAQAKLLRVPAAQGYLLGRPERLT

Sequences:

>Translated_236_residues
MTFIPVRSVIDKQLFEHVYQPLWNLMNWSIFGYESLLRVNGVKNIEQFFQKAREEGCLYELDLISLESSISQFPFLEQKR
GLLFVNVYPSTISRREFAQLLKKMVERFPYIKNRIVFELNETTEDDDRWKDGELKAAVQWIREHGFYIAVDDVGKGASTL
QKIIELQPDYIKLDRYFAQGLAVNVEKQRMLSLLVNYCSPVLVLEGIEKEVDLAQAKLLRVPAAQGYLLGRPERLT
>Mature_235_residues
TFIPVRSVIDKQLFEHVYQPLWNLMNWSIFGYESLLRVNGVKNIEQFFQKAREEGCLYELDLISLESSISQFPFLEQKRG
LLFVNVYPSTISRREFAQLLKKMVERFPYIKNRIVFELNETTEDDDRWKDGELKAAVQWIREHGFYIAVDDVGKGASTLQ
KIIELQPDYIKLDRYFAQGLAVNVEKQRMLSLLVNYCSPVLVLEGIEKEVDLAQAKLLRVPAAQGYLLGRPERLT

Specific function: Overexpression reduces biofilm formation. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1787055, Length=226, Percent_Identity=26.5486725663717, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 27529; Mature: 27398

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFIPVRSVIDKQLFEHVYQPLWNLMNWSIFGYESLLRVNGVKNIEQFFQKAREEGCLYE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEE
LDLISLESSISQFPFLEQKRGLLFVNVYPSTISRREFAQLLKKMVERFPYIKNRIVFELN
EHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEC
ETTEDDDRWKDGELKAAVQWIREHGFYIAVDDVGKGASTLQKIIELQPDYIKLDRYFAQG
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LAVNVEKQRMLSLLVNYCSPVLVLEGIEKEVDLAQAKLLRVPAAQGYLLGRPERLT
HEECHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure 
TFIPVRSVIDKQLFEHVYQPLWNLMNWSIFGYESLLRVNGVKNIEQFFQKAREEGCLYE
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEE
LDLISLESSISQFPFLEQKRGLLFVNVYPSTISRREFAQLLKKMVERFPYIKNRIVFELN
EHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEC
ETTEDDDRWKDGELKAAVQWIREHGFYIAVDDVGKGASTLQKIIELQPDYIKLDRYFAQG
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LAVNVEKQRMLSLLVNYCSPVLVLEGIEKEVDLAQAKLLRVPAAQGYLLGRPERLT
HEECHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]