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The map label for this gene is uvsE [H]

Identifier: 138895214

GI number: 138895214

Start: 1636018

End: 1636983

Strand: Direct

Name: uvsE [H]

Synonym: GTNG_1554

Alternate gene names: 138895214

Gene position: 1636018-1636983 (Clockwise)

Preceding gene: 138895213

Following gene: 138895215

Centisome position: 46.08

GC content: 51.35

Gene sequence:

>966_bases
ATGACGGTTGTCCGGCTTGGCTATGTCGCCATGAGCGTGCATGTTCCCCATTGCTCTCCCTCACAGACGATGACCGTAGC
GCAATTTCGCGTGCTTCGCGACCGCGAGGCGGCAATTCGCAAGCTTGAACGGATTGCTCGTTCGAATATCAACAATTGCC
TTCGCTTGCTCAAGCATAACAAGGCACATGAGATCCGGTTTTTTCGTCTCAGCTCACGGCTCATTCCGCTCGCCAATCAT
CCGGAATTAGAGAACTGGGATTATCTCGCCCCGATTCGCGAGGCGTTGCAAACGATCGCTCTGTTTTTGCAGGAGTATCC
GATGCGTCTTGATTTTCACCCTGAGCATTTTGTTGTGCTCAATTCTCCCGATCCTGACGTGTTCCGCGCCTCATTGAACA
CGTTAAAGCTGCACGCGGAGCTATTGAGCGGGATGGGGATTGATCTCGAACACCGTTGCGTGCTCCATATCGGCGGCGGG
TACGGTGATAAAGAGAAAGCGTTGGAGCAGCTGATTCACAATTGGGCGTACGTGCCTGTTTGGGGGCAGCGGATGATCAT
GTTTGAAAATGATGATACGGTGTTTACGTTGCGTGATGCACTGTATGCATGCGAAAAGCTCAGCGTGCCGCTCGTCTTTG
ATTTGCACCACCATCTCGCCAATCACGACGAAGAAGACTGGCGGCCGGACTGGGAACGGATCGTGGCGACATGGCACCAC
TCACCACTACCCATGAAAATGCATATCTCAAGTCCAAAAAGCGATAGACAGTTTCGCGCTCATCATGATTTCGTCGATGC
CGAGATGTTCATCCGCTTTTTGCGGGAAGTGAAAGGCACCGTTAAGCAGCTTGACTGCATGATTGAAGCGAAACAAAAAG
ATGAGGCGCTGTTTCAGCTTGTGCGTGACCTCAAGCACTATAACGATCTTGAATGGATCGACGGGGCGAGTTTTTTCATT
AAATGA

Upstream 100 bases:

>100_bases
CATTGTGCTGGCTGTTACAAAACCATGTTCGTTCATAGGCATTATTCAGGCTGGGCATACTAACAGCCGCAATCGATGAA
CAGAACGGAGGAGAATGATG

Downstream 100 bases:

>100_bases
TCTTTCTTTTACCAGTGTTTATTTTCGTCCCAAGCACACTGCTCTCGTATGGCTAAATGCTTCAATGGAATGAGCAGATA
AAAGCTTCTAAAGCGTAAAA

Product: putative UV damage endonuclease

Products: NA

Alternate protein names: UV-endonuclease; UVED [H]

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTVVRLGYVAMSVHVPHCSPSQTMTVAQFRVLRDREAAIRKLERIARSNINNCLRLLKHNKAHEIRFFRLSSRLIPLANH
PELENWDYLAPIREALQTIALFLQEYPMRLDFHPEHFVVLNSPDPDVFRASLNTLKLHAELLSGMGIDLEHRCVLHIGGG
YGDKEKALEQLIHNWAYVPVWGQRMIMFENDDTVFTLRDALYACEKLSVPLVFDLHHHLANHDEEDWRPDWERIVATWHH
SPLPMKMHISSPKSDRQFRAHHDFVDAEMFIRFLREVKGTVKQLDCMIEAKQKDEALFQLVRDLKHYNDLEWIDGASFFI
K

Sequences:

>Translated_321_residues
MTVVRLGYVAMSVHVPHCSPSQTMTVAQFRVLRDREAAIRKLERIARSNINNCLRLLKHNKAHEIRFFRLSSRLIPLANH
PELENWDYLAPIREALQTIALFLQEYPMRLDFHPEHFVVLNSPDPDVFRASLNTLKLHAELLSGMGIDLEHRCVLHIGGG
YGDKEKALEQLIHNWAYVPVWGQRMIMFENDDTVFTLRDALYACEKLSVPLVFDLHHHLANHDEEDWRPDWERIVATWHH
SPLPMKMHISSPKSDRQFRAHHDFVDAEMFIRFLREVKGTVKQLDCMIEAKQKDEALFQLVRDLKHYNDLEWIDGASFFI
K
>Mature_320_residues
TVVRLGYVAMSVHVPHCSPSQTMTVAQFRVLRDREAAIRKLERIARSNINNCLRLLKHNKAHEIRFFRLSSRLIPLANHP
ELENWDYLAPIREALQTIALFLQEYPMRLDFHPEHFVVLNSPDPDVFRASLNTLKLHAELLSGMGIDLEHRCVLHIGGGY
GDKEKALEQLIHNWAYVPVWGQRMIMFENDDTVFTLRDALYACEKLSVPLVFDLHHHLANHDEEDWRPDWERIVATWHHS
PLPMKMHISSPKSDRQFRAHHDFVDAEMFIRFLREVKGTVKQLDCMIEAKQKDEALFQLVRDLKHYNDLEWIDGASFFIK

Specific function: Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion [H]

COG id: COG4294

COG function: function code L; UV damage repair endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uve1/uvsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004601 [H]

Pfam domain/function: PF03851 UvdE [H]

EC number: NA

Molecular weight: Translated: 37683; Mature: 37552

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVRLGYVAMSVHVPHCSPSQTMTVAQFRVLRDREAAIRKLERIARSNINNCLRLLKHN
CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
KAHEIRFFRLSSRLIPLANHPELENWDYLAPIREALQTIALFLQEYPMRLDFHPEHFVVL
CCHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEE
NSPDPDVFRASLNTLKLHAELLSGMGIDLEHRCVLHIGGGYGDKEKALEQLIHNWAYVPV
ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEE
WGQRMIMFENDDTVFTLRDALYACEKLSVPLVFDLHHHLANHDEEDWRPDWERIVATWHH
ECCEEEEEECCCCEEEHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHCC
SPLPMKMHISSPKSDRQFRAHHDFVDAEMFIRFLREVKGTVKQLDCMIEAKQKDEALFQL
CCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDLKHYNDLEWIDGASFFIK
HHHHHHCCCCCEECCCCEEEC
>Mature Secondary Structure 
TVVRLGYVAMSVHVPHCSPSQTMTVAQFRVLRDREAAIRKLERIARSNINNCLRLLKHN
EEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
KAHEIRFFRLSSRLIPLANHPELENWDYLAPIREALQTIALFLQEYPMRLDFHPEHFVVL
CCHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEE
NSPDPDVFRASLNTLKLHAELLSGMGIDLEHRCVLHIGGGYGDKEKALEQLIHNWAYVPV
ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEE
WGQRMIMFENDDTVFTLRDALYACEKLSVPLVFDLHHHLANHDEEDWRPDWERIVATWHH
ECCEEEEEECCCCEEEHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHCC
SPLPMKMHISSPKSDRQFRAHHDFVDAEMFIRFLREVKGTVKQLDCMIEAKQKDEALFQL
CCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDLKHYNDLEWIDGASFFIK
HHHHHHCCCCCEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]