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The map label for this gene is ydbT [H]

Identifier: 138895201

GI number: 138895201

Start: 1622562

End: 1624004

Strand: Direct

Name: ydbT [H]

Synonym: GTNG_1541

Alternate gene names: 138895201

Gene position: 1622562-1624004 (Clockwise)

Preceding gene: 138895200

Following gene: 138895202

Centisome position: 45.7

GC content: 55.99

Gene sequence:

>1443_bases
ATGAATAAGCGCCGTCTTCATCCCGTAGCGATGGTAACCCGAGTAGGGAGAGAGCTGAAAAACGTGCTGCTCCCGCTTTT
GGTAGTCGTAGTAGCTGGCAGCGGCGGCGATTTTTCTTGGCGGGATCTCGTCGTGCCGCTTCTTGTGCTCGCCTACACGA
TCGTTGCCGGCATTCTTTCCTGGGTTCGCTTCACTTACGGCTGGGATGATCAAACATTGCAAGTGGAAAAAGGAGTATTC
GTCCGCAAAAAACGGACAATCCCGTTCGAGCGCATTCAAGGCATTTCCATAACGGAAGGAATATGGCAACGGCTGGCGGG
GGTCGTGAAAGTCCATATTGAAACGGCTGGAAACGTGCCCGGAGAAGCAGAAGTGACGCTCGCGGCCGTTTCGAGGGAAG
AGGTTCGCCGCTTGCAGCGCGATATCGAGCAAGCAAAAGAGCAGGCAGAGGAGTCTAATCCATGGAACGACCAGGAGAAG
CGACTACTGTCTCCTCCCTTATTTACGCTTTCCGTAAAGGAAGTGTGGCTTGCCGCTGTGACAAGCGGGGGAGCGTTTGG
CGTAGTGGCGGCCGTTTGGGCCTTTCTGTCTCAGCTCGGAGATCTTATCCCGTATGAAGCGCTCTTTCGCAATGTGCAGG
CGACATGGAATGGACATGGGCGGTGGTACATCGGAATCATCGGTTTGGTTGCACTGTTGGCCGCGTATGGAGTGGCGATC
GTACAAAATATGATCCGCTTCGCTTCGTTTGCCGTGCGCAAGCAAGAAGATACGATTGTCATCACCCGCGGTTGGCTTGA
ACGCAAAACGGTATCCGTCCCCATTGGCCGCGTCCAAGGGGTGATGATCCATGAGAGCTGGCTGCGGCGTTTGTTCGGGT
ACGCGACCGTGTCGCTCATTCATGCTGGTGGAGCGCTTGACGGCGGCCCACCGGGTGATGTGGTTCTTTGCCCGCTTGTA
AAAAAAGAGCGCGTCTCCTCGATTGTTCACGCGTGCCTGCCGGAGTATGATCTCGATGTCACGTTCCACCCATTGCCGGA
GCGCGCCAAAATCCGTTATATGCTTCGGCCGCTCTATTGGTTGATGGTCCCGGTGCTATTGGCCGCCTACATCGAGCGCC
CGTGGGGAGCAGGACTTTTGCTTGTGTTGCCGCTCGCCGCGTGGATTGGGGTGCGTCGCTATCGGGCAGCCGGTTGGGCG
CTTTCTTCAAGGCAGCTAACACTCCGGAGCGGCTGGTTCCGCCAAACGACAACATACATGTTGAAACGCCGCCTGCAATC
GATTGAGGTGTCGGCGACATGGTGGCAAAAGCGAAAACGATTAGCAACCATTTCCGCCGCCGTTATGCCACTTGGTACTT
CCGCTCGCGTCGTCGATGTGGATGGGCAAGACGCAGCAGCGGTGTATCGCTGGATGCAAGTGGAAAGAAAGGATGAAACA
TGA

Upstream 100 bases:

>100_bases
ACGGCCGCCACTGTCCATGAAATCCCTGCGCTATCTGAACCGGAGGCGGAAAAGCTCTGCCGGTTGATCGCTGAGTGGGC
GAAGGTGGCGGATCGGAACG

Downstream 100 bases:

>100_bases
TGAGTGCGTTTGTTCATGGATTCATCTTGGCGTTGGGACTGATTTTGCCGCTTGGTGTGCAAAATGTGTTCATTTTGACT
CAAGGAGCGGTTCAGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MNKRRLHPVAMVTRVGRELKNVLLPLLVVVVAGSGGDFSWRDLVVPLLVLAYTIVAGILSWVRFTYGWDDQTLQVEKGVF
VRKKRTIPFERIQGISITEGIWQRLAGVVKVHIETAGNVPGEAEVTLAAVSREEVRRLQRDIEQAKEQAEESNPWNDQEK
RLLSPPLFTLSVKEVWLAAVTSGGAFGVVAAVWAFLSQLGDLIPYEALFRNVQATWNGHGRWYIGIIGLVALLAAYGVAI
VQNMIRFASFAVRKQEDTIVITRGWLERKTVSVPIGRVQGVMIHESWLRRLFGYATVSLIHAGGALDGGPPGDVVLCPLV
KKERVSSIVHACLPEYDLDVTFHPLPERAKIRYMLRPLYWLMVPVLLAAYIERPWGAGLLLVLPLAAWIGVRRYRAAGWA
LSSRQLTLRSGWFRQTTTYMLKRRLQSIEVSATWWQKRKRLATISAAVMPLGTSARVVDVDGQDAAAVYRWMQVERKDET

Sequences:

>Translated_480_residues
MNKRRLHPVAMVTRVGRELKNVLLPLLVVVVAGSGGDFSWRDLVVPLLVLAYTIVAGILSWVRFTYGWDDQTLQVEKGVF
VRKKRTIPFERIQGISITEGIWQRLAGVVKVHIETAGNVPGEAEVTLAAVSREEVRRLQRDIEQAKEQAEESNPWNDQEK
RLLSPPLFTLSVKEVWLAAVTSGGAFGVVAAVWAFLSQLGDLIPYEALFRNVQATWNGHGRWYIGIIGLVALLAAYGVAI
VQNMIRFASFAVRKQEDTIVITRGWLERKTVSVPIGRVQGVMIHESWLRRLFGYATVSLIHAGGALDGGPPGDVVLCPLV
KKERVSSIVHACLPEYDLDVTFHPLPERAKIRYMLRPLYWLMVPVLLAAYIERPWGAGLLLVLPLAAWIGVRRYRAAGWA
LSSRQLTLRSGWFRQTTTYMLKRRLQSIEVSATWWQKRKRLATISAAVMPLGTSARVVDVDGQDAAAVYRWMQVERKDET
>Mature_480_residues
MNKRRLHPVAMVTRVGRELKNVLLPLLVVVVAGSGGDFSWRDLVVPLLVLAYTIVAGILSWVRFTYGWDDQTLQVEKGVF
VRKKRTIPFERIQGISITEGIWQRLAGVVKVHIETAGNVPGEAEVTLAAVSREEVRRLQRDIEQAKEQAEESNPWNDQEK
RLLSPPLFTLSVKEVWLAAVTSGGAFGVVAAVWAFLSQLGDLIPYEALFRNVQATWNGHGRWYIGIIGLVALLAAYGVAI
VQNMIRFASFAVRKQEDTIVITRGWLERKTVSVPIGRVQGVMIHESWLRRLFGYATVSLIHAGGALDGGPPGDVVLCPLV
KKERVSSIVHACLPEYDLDVTFHPLPERAKIRYMLRPLYWLMVPVLLAAYIERPWGAGLLLVLPLAAWIGVRRYRAAGWA
LSSRQLTLRSGWFRQTTTYMLKRRLQSIEVSATWWQKRKRLATISAAVMPLGTSARVVDVDGQDAAAVYRWMQVERKDET

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 53904; Mature: 53904

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRLHPVAMVTRVGRELKNVLLPLLVVVVAGSGGDFSWRDLVVPLLVLAYTIVAGILS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WVRFTYGWDDQTLQVEKGVFVRKKRTIPFERIQGISITEGIWQRLAGVVKVHIETAGNVP
HHHHHCCCCCCEEEECCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCC
GEAEVTLAAVSREEVRRLQRDIEQAKEQAEESNPWNDQEKRLLSPPLFTLSVKEVWLAAV
CCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEHHHHHHHHHH
TSGGAFGVVAAVWAFLSQLGDLIPYEALFRNVQATWNGHGRWYIGIIGLVALLAAYGVAI
HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHEECCCCCEEHHHHHHHHHHHHHHHHH
VQNMIRFASFAVRKQEDTIVITRGWLERKTVSVPIGRVQGVMIHESWLRRLFGYATVSLI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCHHHHCCCEEHHHHHHHHHHHHHHHHH
HAGGALDGGPPGDVVLCPLVKKERVSSIVHACLPEYDLDVTFHPLPERAKIRYMLRPLYW
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH
LMVPVLLAAYIERPWGAGLLLVLPLAAWIGVRRYRAAGWALSSRQLTLRSGWFRQTTTYM
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCHHHHHHHH
LKRRLQSIEVSATWWQKRKRLATISAAVMPLGTSARVVDVDGQDAAAVYRWMQVERKDET
HHHHHHHHEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKRRLHPVAMVTRVGRELKNVLLPLLVVVVAGSGGDFSWRDLVVPLLVLAYTIVAGILS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WVRFTYGWDDQTLQVEKGVFVRKKRTIPFERIQGISITEGIWQRLAGVVKVHIETAGNVP
HHHHHCCCCCCEEEECCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCC
GEAEVTLAAVSREEVRRLQRDIEQAKEQAEESNPWNDQEKRLLSPPLFTLSVKEVWLAAV
CCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEHHHHHHHHHH
TSGGAFGVVAAVWAFLSQLGDLIPYEALFRNVQATWNGHGRWYIGIIGLVALLAAYGVAI
HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHEECCCCCEEHHHHHHHHHHHHHHHHH
VQNMIRFASFAVRKQEDTIVITRGWLERKTVSVPIGRVQGVMIHESWLRRLFGYATVSLI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCHHHHCCCEEHHHHHHHHHHHHHHHHH
HAGGALDGGPPGDVVLCPLVKKERVSSIVHACLPEYDLDVTFHPLPERAKIRYMLRPLYW
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH
LMVPVLLAAYIERPWGAGLLLVLPLAAWIGVRRYRAAGWALSSRQLTLRSGWFRQTTTYM
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCHHHHHHHH
LKRRLQSIEVSATWWQKRKRLATISAAVMPLGTSARVVDVDGQDAAAVYRWMQVERKDET
HHHHHHHHEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]