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The map label for this gene is yisU [H]

Identifier: 138895202

GI number: 138895202

Start: 1624001

End: 1624627

Strand: Direct

Name: yisU [H]

Synonym: GTNG_1542

Alternate gene names: 138895202

Gene position: 1624001-1624627 (Clockwise)

Preceding gene: 138895201

Following gene: 138895203

Centisome position: 45.74

GC content: 54.23

Gene sequence:

>627_bases
ATGATGAGTGCGTTTGTTCATGGATTCATCTTGGCGTTGGGACTGATTTTGCCGCTTGGTGTGCAAAATGTGTTCATTTT
GACTCAAGGAGCGGTTCAGCGGCGTTGGGTGCACGCCTTGCCCGCGGTGCTGACGGCGTCGTTGTGTGATACGCTGCTCA
TTTTGCTTGCCGTTTTGGGTGTCTCCCTCGTTTGGCTTGGTTCCTCCTGGACGAAAATGGTTGTGATGGGGGTGGGCGTC
CTTTTTTTGCTGTATATGGGCTGGAGCACATGGAAGAGCGAGCCTGCAACAGGCGAAAGCGAAGCATCGGAAATGTTTCC
GCCTCGCAAACAAATCGCTTTCGCCGCCTCAGTATCGCTGCTGAACCCTCATGCCATTTTGGATACGATCGGTGTCATCG
GCACGAACTCGCTCCGCTATACGGGATTGGAGAAAGCGTTGTTTGCTGCGGCGTGCATTCTTGTCTCGTGGGCTTGGTTT
GTTGGGCTTTCCCTCGCTGGAAAGATGCTTGGTCGCTTCGATGGCAGCGGGAGGGGATTGCGAACCATGAACCGGGTTTC
CGCGCTCATCATTTGGGGAGTGGCTGGATATATGCTCATGGACCTGTTTCACGATCGGCTGCCCTAA

Upstream 100 bases:

>100_bases
CCGTTATGCCACTTGGTACTTCCGCTCGCGTCGTCGATGTGGATGGGCAAGACGCAGCAGCGGTGTATCGCTGGATGCAA
GTGGAAAGAAAGGATGAAAC

Downstream 100 bases:

>100_bases
GACGGCCGAAGGGATGGCGCGCTTAGCATGAATGTAACGAACCCGTATCCTGAAGCAAGCCGAGCGGTTTCCAACGAACG
GATGATCTGCTAAAATAGGA

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MMSAFVHGFILALGLILPLGVQNVFILTQGAVQRRWVHALPAVLTASLCDTLLILLAVLGVSLVWLGSSWTKMVVMGVGV
LFLLYMGWSTWKSEPATGESEASEMFPPRKQIAFAASVSLLNPHAILDTIGVIGTNSLRYTGLEKALFAAACILVSWAWF
VGLSLAGKMLGRFDGSGRGLRTMNRVSALIIWGVAGYMLMDLFHDRLP

Sequences:

>Translated_208_residues
MMSAFVHGFILALGLILPLGVQNVFILTQGAVQRRWVHALPAVLTASLCDTLLILLAVLGVSLVWLGSSWTKMVVMGVGV
LFLLYMGWSTWKSEPATGESEASEMFPPRKQIAFAASVSLLNPHAILDTIGVIGTNSLRYTGLEKALFAAACILVSWAWF
VGLSLAGKMLGRFDGSGRGLRTMNRVSALIIWGVAGYMLMDLFHDRLP
>Mature_208_residues
MMSAFVHGFILALGLILPLGVQNVFILTQGAVQRRWVHALPAVLTASLCDTLLILLAVLGVSLVWLGSSWTKMVVMGVGV
LFLLYMGWSTWKSEPATGESEASEMFPPRKQIAFAASVSLLNPHAILDTIGVIGTNSLRYTGLEKALFAAACILVSWAWF
VGLSLAGKMLGRFDGSGRGLRTMNRVSALIIWGVAGYMLMDLFHDRLP

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=204, Percent_Identity=32.843137254902, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22523; Mature: 22523

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAFVHGFILALGLILPLGVQNVFILTQGAVQRRWVHALPAVLTASLCDTLLILLAVLG
CCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLVWLGSSWTKMVVMGVGVLFLLYMGWSTWKSEPATGESEASEMFPPRKQIAFAASVSL
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
LNPHAILDTIGVIGTNSLRYTGLEKALFAAACILVSWAWFVGLSLAGKMLGRFDGSGRGL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
RTMNRVSALIIWGVAGYMLMDLFHDRLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSAFVHGFILALGLILPLGVQNVFILTQGAVQRRWVHALPAVLTASLCDTLLILLAVLG
CCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLVWLGSSWTKMVVMGVGVLFLLYMGWSTWKSEPATGESEASEMFPPRKQIAFAASVSL
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
LNPHAILDTIGVIGTNSLRYTGLEKALFAAACILVSWAWFVGLSLAGKMLGRFDGSGRGL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
RTMNRVSALIIWGVAGYMLMDLFHDRLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]