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The map label for this gene is endR [H]

Identifier: 138895151

GI number: 138895151

Start: 1574548

End: 1575561

Strand: Direct

Name: endR [H]

Synonym: GTNG_1489

Alternate gene names: 138895151

Gene position: 1574548-1575561 (Clockwise)

Preceding gene: 138895150

Following gene: 138895152

Centisome position: 44.35

GC content: 42.6

Gene sequence:

>1014_bases
GTGAAAAAGGTCACATTGGCTGATGTTGCAAAAGAGGCAGGAGTATCGAAAAGCACAGTATCGCAATTTTTAAATCAACG
GTATGAACATATGGGCGATGAAACGAGGGAACGGATTAAAGCGGCCATTGAAAAACTTGGTTATCGCCCAAACTATGTTG
CCCGAAGTTTAAAACAAAAACGGACATCTATGATCGGGATTATTATCGCCAATATTATGCATCGGGTGTCAACGGAGTTT
AGCCGAGCCATTGAAGATTATTGTCATGAACATGATATGCAGGCGATCATCTGTAATGCAGATGATGACCCTGCCAAAGA
GAGAAAGTATATTGAAGTGTTGCGTGCGCGTCAAGTAGATGGGTTAGTCATTGTTCCGACTGGAGGCAATATCGAGCTTT
ATCAACAAATGGAACGGGAAAACTATCCTGTGGTCTTTATGGACCGGAAAGTTGATGGGATCAATGTCCATACGATCGTA
GTGAATAACAAGGGAGCGGCATATGAAGCGGTATCTCATCTTATTGAACAAGGGCATACACGCATTGGAATCGTAACCCC
ACCTTTAACCGTCTCTCCACGCATTGAGCGGATGAGTGGCTATAAACAGGCATTAATTGATCATGGAATTGAGATCAGAC
CAGAATATATGATTTCTGATGAAATTCATCGTCTTACATCGCGATTAGAGGAGATGTTCTCCCTGCCGCAAAAGCCAACC
GCTTTATTAGCAGGAAATGATTTATCCTTCTTTGAAGTGATGGCGTTTATTAAGCAGAATCGGATCCGCGTTCCCGAAGA
CTTAGCGGTCGTTGTTTTTGATAATATTCCATTTGCCGCTATTTCAACTCCAACGATCACCACCATTGCCCAGCCGGCAT
ATGAAATGGGCAAAAAAGCGGCCGAATTGTTATGGAAACAAATTCATAATGAATGTGACGAGGCGCAATTATATACGTTT
TTCTGTCAGTTAATCGTTCGTGAGTCTTCGGGAACGAAAAAAGCTGATGGCTAA

Upstream 100 bases:

>100_bases
TAGGGCAGCCAAATAGCTCCGAATTTGGGGAGACTTTGTTATTCTTGCTAAAATAAAAGGGATGACAAAACCAATTCATG
GATAACAAAGGATGAGGCAA

Downstream 100 bases:

>100_bases
CTTACAGGATGAATGGAGAGTGGAAGATGTATATTCAGCTTGCGCTTGATCGAATGGATATCAATCAAGCAATTCAAATC
ACTCAACAAGTTGAGGAGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKKVTLADVAKEAGVSKSTVSQFLNQRYEHMGDETRERIKAAIEKLGYRPNYVARSLKQKRTSMIGIIIANIMHRVSTEF
SRAIEDYCHEHDMQAIICNADDDPAKERKYIEVLRARQVDGLVIVPTGGNIELYQQMERENYPVVFMDRKVDGINVHTIV
VNNKGAAYEAVSHLIEQGHTRIGIVTPPLTVSPRIERMSGYKQALIDHGIEIRPEYMISDEIHRLTSRLEEMFSLPQKPT
ALLAGNDLSFFEVMAFIKQNRIRVPEDLAVVVFDNIPFAAISTPTITTIAQPAYEMGKKAAELLWKQIHNECDEAQLYTF
FCQLIVRESSGTKKADG

Sequences:

>Translated_337_residues
MKKVTLADVAKEAGVSKSTVSQFLNQRYEHMGDETRERIKAAIEKLGYRPNYVARSLKQKRTSMIGIIIANIMHRVSTEF
SRAIEDYCHEHDMQAIICNADDDPAKERKYIEVLRARQVDGLVIVPTGGNIELYQQMERENYPVVFMDRKVDGINVHTIV
VNNKGAAYEAVSHLIEQGHTRIGIVTPPLTVSPRIERMSGYKQALIDHGIEIRPEYMISDEIHRLTSRLEEMFSLPQKPT
ALLAGNDLSFFEVMAFIKQNRIRVPEDLAVVVFDNIPFAAISTPTITTIAQPAYEMGKKAAELLWKQIHNECDEAQLYTF
FCQLIVRESSGTKKADG
>Mature_337_residues
MKKVTLADVAKEAGVSKSTVSQFLNQRYEHMGDETRERIKAAIEKLGYRPNYVARSLKQKRTSMIGIIIANIMHRVSTEF
SRAIEDYCHEHDMQAIICNADDDPAKERKYIEVLRARQVDGLVIVPTGGNIELYQQMERENYPVVFMDRKVDGINVHTIV
VNNKGAAYEAVSHLIEQGHTRIGIVTPPLTVSPRIERMSGYKQALIDHGIEIRPEYMISDEIHRLTSRLEEMFSLPQKPT
ALLAGNDLSFFEVMAFIKQNRIRVPEDLAVVVFDNIPFAAISTPTITTIAQPAYEMGKKAAELLWKQIHNECDEAQLYTF
FCQLIVRESSGTKKADG

Specific function: Putative repressor of the endoglucanase operon [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=328, Percent_Identity=29.8780487804878, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1790194, Length=307, Percent_Identity=32.5732899022801, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1787948, Length=329, Percent_Identity=30.0911854103343, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789068, Length=333, Percent_Identity=28.2282282282282, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788474, Length=336, Percent_Identity=29.1666666666667, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787580, Length=314, Percent_Identity=28.9808917197452, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1789202, Length=301, Percent_Identity=27.5747508305648, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786540, Length=311, Percent_Identity=28.2958199356913, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI48994940, Length=320, Percent_Identity=27.1875, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787906, Length=324, Percent_Identity=26.5432098765432, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790715, Length=311, Percent_Identity=23.4726688102894, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1786268, Length=307, Percent_Identity=26.7100977198697, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1790689, Length=320, Percent_Identity=22.8125, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38212; Mature: 38212

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVTLADVAKEAGVSKSTVSQFLNQRYEHMGDETRERIKAAIEKLGYRPNYVARSLKQK
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RTSMIGIIIANIMHRVSTEFSRAIEDYCHEHDMQAIICNADDDPAKERKYIEVLRARQVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
GLVIVPTGGNIELYQQMERENYPVVFMDRKVDGINVHTIVVNNKGAAYEAVSHLIEQGHT
CEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCCC
RIGIVTPPLTVSPRIERMSGYKQALIDHGIEIRPEYMISDEIHRLTSRLEEMFSLPQKPT
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
ALLAGNDLSFFEVMAFIKQNRIRVPEDLAVVVFDNIPFAAISTPTITTIAQPAYEMGKKA
EEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHH
AELLWKQIHNECDEAQLYTFFCQLIVRESSGTKKADG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKVTLADVAKEAGVSKSTVSQFLNQRYEHMGDETRERIKAAIEKLGYRPNYVARSLKQK
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RTSMIGIIIANIMHRVSTEFSRAIEDYCHEHDMQAIICNADDDPAKERKYIEVLRARQVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
GLVIVPTGGNIELYQQMERENYPVVFMDRKVDGINVHTIVVNNKGAAYEAVSHLIEQGHT
CEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCCC
RIGIVTPPLTVSPRIERMSGYKQALIDHGIEIRPEYMISDEIHRLTSRLEEMFSLPQKPT
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
ALLAGNDLSFFEVMAFIKQNRIRVPEDLAVVVFDNIPFAAISTPTITTIAQPAYEMGKKA
EEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHH
AELLWKQIHNECDEAQLYTFFCQLIVRESSGTKKADG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2307659; 1639817 [H]