Click here to switch to the map view.

The map label for this gene is rsbW

Identifier: 138895137

GI number: 138895137

Start: 1558869

End: 1559303

Strand: Direct

Name: rsbW

Synonym: GTNG_1475

Alternate gene names: NA

Gene position: 1558869-1559303 (Clockwise)

Preceding gene: 138895136

Following gene: 138895138

Centisome position: 43.91

GC content: 51.03

Gene sequence:

>435_bases
TTGGTGGCTGAGTGGGTGGTGCGCTGTAAGGCGAGCGAGGAGGCGATTGCATTTTGCGATCTGATCGCAGAGCAAACCGC
CTGTTTATTTGCTGTCCGCGATGCCGAATTGTTTGTGCTGGCTGTGCATGAGGCGATTGTTAATGCGGTGAAAGCCGTTC
GGCGGTTAGGACTGAACGAGGGGACGATTTTATTGTTTTTTTCCATTACAGATGATGAAGTGACGGTGGCGGTCGAGGAT
GACGGTGACGGTATCCCAAAGGAAATGTTCAAACAGCTTGGTAGAAAAACGCTTTCCGATGTGCTCCTAGCTGAATCAGG
TCGCGGGCTATTGCTGATTCATGAAATTATGGATATGACGGCTGTAGTGGAGCGGGCGGATGGACGGCGGACGCTGGTGA
TGAAAATGCAAAGAGCGCAACAAAGACCGTTTTAG

Upstream 100 bases:

>100_bases
TTTCCTAGAACAATTAATCAGCCAAAGTCCTTCGCTCGCCAGGCCGACTGATGACGTTTGTTTGCTGTCAATTACAGTCC
ATGGGTAGGCGAGAGCTCAC

Downstream 100 bases:

>100_bases
TCCAGCTTCTCGATGAACATAGGCGGCAGGGGCGGAGCAGGGTTGGTCAATGATAGGGGGATATGATGAAACAGCATTGG
TTGTCGTTTGAACTGGAAAT

Product: anti-sigma B factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVAEWVVRCKASEEAIAFCDLIAEQTACLFAVRDAELFVLAVHEAIVNAVKAVRRLGLNEGTILLFFSITDDEVTVAVED
DGDGIPKEMFKQLGRKTLSDVLLAESGRGLLLIHEIMDMTAVVERADGRRTLVMKMQRAQQRPF

Sequences:

>Translated_144_residues
MVAEWVVRCKASEEAIAFCDLIAEQTACLFAVRDAELFVLAVHEAIVNAVKAVRRLGLNEGTILLFFSITDDEVTVAVED
DGDGIPKEMFKQLGRKTLSDVLLAESGRGLLLIHEIMDMTAVVERADGRRTLVMKMQRAQQRPF
>Mature_144_residues
MVAEWVVRCKASEEAIAFCDLIAEQTACLFAVRDAELFVLAVHEAIVNAVKAVRRLGLNEGTILLFFSITDDEVTVAVED
DGDGIPKEMFKQLGRKTLSDVLLAESGRGLLLIHEIMDMTAVVERADGRRTLVMKMQRAQQRPF

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16008; Mature: 16008

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEWVVRCKASEEAIAFCDLIAEQTACLFAVRDAELFVLAVHEAIVNAVKAVRRLGLNE
CCCHHHEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCC
GTILLFFSITDDEVTVAVEDDGDGIPKEMFKQLGRKTLSDVLLAESGRGLLLIHEIMDMT
CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
AVVERADGRRTLVMKMQRAQQRPF
HHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVAEWVVRCKASEEAIAFCDLIAEQTACLFAVRDAELFVLAVHEAIVNAVKAVRRLGLNE
CCCHHHEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCC
GTILLFFSITDDEVTVAVEDDGDGIPKEMFKQLGRKTLSDVLLAESGRGLLLIHEIMDMT
CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
AVVERADGRRTLVMKMQRAQQRPF
HHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA