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The map label for this gene is rsbP [H]

Identifier: 138895136

GI number: 138895136

Start: 1557411

End: 1558856

Strand: Direct

Name: rsbP [H]

Synonym: GTNG_1474

Alternate gene names: 138895136

Gene position: 1557411-1558856 (Clockwise)

Preceding gene: 138895135

Following gene: 138895137

Centisome position: 43.87

GC content: 50.97

Gene sequence:

>1446_bases
ATGGTGAAAGCGAATGTACAGGCGATCGACCAGCTAGACGCTGAACGGTTGGGCAGCGGCATGATGATTACGGACCGCCG
ATTTTTCATTCTTGCGGTCAGCGAGCGAATGACACAGCGGCTCGGATGGGCCAAAGAGGAATTGATCGGGCGGCCGGCCA
GCTCTCTTTTTCCGGTAGAACGATCTGCCGGCTTGTTTGACCATATCGCCCAAGCGGTGAAAAAGGACGGATATTGGCAA
GGGGAGGCGCACCATGTAGTCAAAGATGGGCAGATGTACGCGAGTCGGATGAACGTTTATGCCTTATCGGGGAGCGAAGG
GGAATGGCTCGTTTGGGAGTTTGCTGAACGAAAGACCTCGCTCTCTGCCTCCACTTTGACGTCGGCTGAGGTGTTGAGCA
CCATTTATGCTTCTGCGCCGTTTGCCGTTGTTCCAGTGGCAGCGGACGGGACGGTGCAAGATTGGGGGAACGGTGCCGAA
GCGCTGTTCGGATACCGAAAAGAGGAAGCGATCGGACGTCCGATATGGACGCTTTTCCGCCACAGCGGTCAAACGCCGCT
CCCGTTTCCACCTGAGAGGCGGCAATGCGGTGAAGGAATTGTACAACGCGAAGACGGTACGCCGGTCTATATCGCCTATA
CGATCATTCCGGTGCCAAGTTCAAGCGGATATGTTGTTCTTGCAGAAGATATCACCAAGCGAAAACAAAAGGAGGGTGAG
CGTCGGCGCCAAGTCGAGCTGGCGAAAAAAATTCAGCACAATTTGTTGACACCGCTCATCCAAAATAAGGAAGTAACGAT
GGAAGCGGTCTATATTCCGTCCGATGATTTGTCCGGTGATATTTATGCCTGCTACCAAATCGATTTATACCGCTATGGGG
TGATCGTCATCGACGTAATGGGTCATGGCATTTCCTCGGCTTTAGTGAGCATGCTGCTCCGCTCGCTTTTACGTGGGTTG
ATTGTGCGAGTTATTGATCCCGTTTCCGTGGCAAGTGAGCTGGAGAAGCATGTGCAAAACTTATTCCCGGACGAGACGAA
TGACATGCGTTATTTATTTTCGATGATTTATTTAGTTATTGATACAAAAGAGCGCAAAATTGAATACACGAATGCCGGCC
ATCCCGCCGGGCTGCTTGTCTTTGAGGATGGGAGTGTGCATGAGTTGGATAAAGGCGGCTTGGCGATCGGCAGCCCGTTT
TCTTTGCCGTTTGAAAAAGGGGTGATCGATTACAATAGGCGAGCCCGCCTGCTTCTATATACGGACGGCATTTTAGAGGA
AATGGATCCATCGATTTTGCAAAGCATTGAAAAAATTCGGACATGCACGCAAATGTACCGTCATTTGCCGGATAAAGGTT
TCCTAGAACAATTAATCAGCCAAAGTCCTTCGCTCGCCAGGCCGACTGATGACGTTTGTTTGCTGTCAATTACAGTCCAT
GGGTAG

Upstream 100 bases:

>100_bases
GGTGGAAGAAGCACGGCGCCGAGGCGCATCTTTCGTTTCGGAAAGCCGGTGTCGGCTGAGGAACTAAAGATTTTACTATT
AAAAGAAAAAGGGTTGAACG

Downstream 100 bases:

>100_bases
GCGAGAGCTCACTTGGTGGCTGAGTGGGTGGTGCGCTGTAAGGCGAGCGAGGAGGCGATTGCATTTTGCGATCTGATCGC
AGAGCAAACCGCCTGTTTAT

Product: sigma factor SigB regulation protein RsbU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MVKANVQAIDQLDAERLGSGMMITDRRFFILAVSERMTQRLGWAKEELIGRPASSLFPVERSAGLFDHIAQAVKKDGYWQ
GEAHHVVKDGQMYASRMNVYALSGSEGEWLVWEFAERKTSLSASTLTSAEVLSTIYASAPFAVVPVAADGTVQDWGNGAE
ALFGYRKEEAIGRPIWTLFRHSGQTPLPFPPERRQCGEGIVQREDGTPVYIAYTIIPVPSSSGYVVLAEDITKRKQKEGE
RRRQVELAKKIQHNLLTPLIQNKEVTMEAVYIPSDDLSGDIYACYQIDLYRYGVIVIDVMGHGISSALVSMLLRSLLRGL
IVRVIDPVSVASELEKHVQNLFPDETNDMRYLFSMIYLVIDTKERKIEYTNAGHPAGLLVFEDGSVHELDKGGLAIGSPF
SLPFEKGVIDYNRRARLLLYTDGILEEMDPSILQSIEKIRTCTQMYRHLPDKGFLEQLISQSPSLARPTDDVCLLSITVH
G

Sequences:

>Translated_481_residues
MVKANVQAIDQLDAERLGSGMMITDRRFFILAVSERMTQRLGWAKEELIGRPASSLFPVERSAGLFDHIAQAVKKDGYWQ
GEAHHVVKDGQMYASRMNVYALSGSEGEWLVWEFAERKTSLSASTLTSAEVLSTIYASAPFAVVPVAADGTVQDWGNGAE
ALFGYRKEEAIGRPIWTLFRHSGQTPLPFPPERRQCGEGIVQREDGTPVYIAYTIIPVPSSSGYVVLAEDITKRKQKEGE
RRRQVELAKKIQHNLLTPLIQNKEVTMEAVYIPSDDLSGDIYACYQIDLYRYGVIVIDVMGHGISSALVSMLLRSLLRGL
IVRVIDPVSVASELEKHVQNLFPDETNDMRYLFSMIYLVIDTKERKIEYTNAGHPAGLLVFEDGSVHELDKGGLAIGSPF
SLPFEKGVIDYNRRARLLLYTDGILEEMDPSILQSIEKIRTCTQMYRHLPDKGFLEQLISQSPSLARPTDDVCLLSITVH
G
>Mature_481_residues
MVKANVQAIDQLDAERLGSGMMITDRRFFILAVSERMTQRLGWAKEELIGRPASSLFPVERSAGLFDHIAQAVKKDGYWQ
GEAHHVVKDGQMYASRMNVYALSGSEGEWLVWEFAERKTSLSASTLTSAEVLSTIYASAPFAVVPVAADGTVQDWGNGAE
ALFGYRKEEAIGRPIWTLFRHSGQTPLPFPPERRQCGEGIVQREDGTPVYIAYTIIPVPSSSGYVVLAEDITKRKQKEGE
RRRQVELAKKIQHNLLTPLIQNKEVTMEAVYIPSDDLSGDIYACYQIDLYRYGVIVIDVMGHGISSALVSMLLRSLLRGL
IVRVIDPVSVASELEKHVQNLFPDETNDMRYLFSMIYLVIDTKERKIEYTNAGHPAGLLVFEDGSVHELDKGGLAIGSPF
SLPFEKGVIDYNRRARLLLYTDGILEEMDPSILQSIEKIRTCTQMYRHLPDKGFLEQLISQSPSLARPTDDVCLLSITVH
G

Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 53773; Mature: 53773

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKANVQAIDQLDAERLGSGMMITDRRFFILAVSERMTQRLGWAKEELIGRPASSLFPVE
CCCCCHHHHHHHCHHHHCCCCEEECCEEEEEEHHHHHHHHHCCCHHHHHCCCCHHCCCCH
RSAGLFDHIAQAVKKDGYWQGEAHHVVKDGQMYASRMNVYALSGSEGEWLVWEFAERKTS
HCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCEEEEEECCCCCEEEEEEHHHHHC
LSASTLTSAEVLSTIYASAPFAVVPVAADGTVQDWGNGAEALFGYRKEEAIGRPIWTLFR
CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCHHHHHCCCHHHHCCCHHHHHHH
HSGQTPLPFPPERRQCGEGIVQREDGTPVYIAYTIIPVPSSSGYVVLAEDITKRKQKEGE
CCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHH
RRRQVELAKKIQHNLLTPLIQNKEVTMEAVYIPSDDLSGDIYACYQIDLYRYGVIVIDVM
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEEEC
GHGISSALVSMLLRSLLRGLIVRVIDPVSVASELEKHVQNLFPDETNDMRYLFSMIYLVI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DTKERKIEYTNAGHPAGLLVFEDGSVHELDKGGLAIGSPFSLPFEKGVIDYNRRARLLLY
CCCHHEEEECCCCCCEEEEEECCCCCEEECCCCEEECCCCCCCHHCCCCCCCCCEEEEEE
TDGILEEMDPSILQSIEKIRTCTQMYRHLPDKGFLEQLISQSPSLARPTDDVCLLSITVH
ECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC
G
C
>Mature Secondary Structure
MVKANVQAIDQLDAERLGSGMMITDRRFFILAVSERMTQRLGWAKEELIGRPASSLFPVE
CCCCCHHHHHHHCHHHHCCCCEEECCEEEEEEHHHHHHHHHCCCHHHHHCCCCHHCCCCH
RSAGLFDHIAQAVKKDGYWQGEAHHVVKDGQMYASRMNVYALSGSEGEWLVWEFAERKTS
HCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCEEEEEECCCCCEEEEEEHHHHHC
LSASTLTSAEVLSTIYASAPFAVVPVAADGTVQDWGNGAEALFGYRKEEAIGRPIWTLFR
CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCHHHHHCCCHHHHCCCHHHHHHH
HSGQTPLPFPPERRQCGEGIVQREDGTPVYIAYTIIPVPSSSGYVVLAEDITKRKQKEGE
CCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHH
RRRQVELAKKIQHNLLTPLIQNKEVTMEAVYIPSDDLSGDIYACYQIDLYRYGVIVIDVM
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEEEC
GHGISSALVSMLLRSLLRGLIVRVIDPVSVASELEKHVQNLFPDETNDMRYLFSMIYLVI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DTKERKIEYTNAGHPAGLLVFEDGSVHELDKGGLAIGSPFSLPFEKGVIDYNRRARLLLY
CCCHHEEEECCCCCCEEEEEECCCCCEEECCCCEEECCCCCCCHHCCCCCCCCCEEEEEE
TDGILEEMDPSILQSIEKIRTCTQMYRHLPDKGFLEQLISQSPSLARPTDDVCLLSITVH
ECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888 [H]