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The map label for this gene is yvgT [H]

Identifier: 138894842

GI number: 138894842

Start: 1248922

End: 1249527

Strand: Reverse

Name: yvgT [H]

Synonym: GTNG_1178

Alternate gene names: 138894842

Gene position: 1249527-1248922 (Counterclockwise)

Preceding gene: 138894847

Following gene: 138894841

Centisome position: 35.19

GC content: 53.63

Gene sequence:

>606_bases
ATGACGTGGGAAGTGTTAAGCATCATCGGAACCATTGCCTTTGCCATCAGCGGGGCGATCGTTGCGATGGAAGAAGAGTA
CGATTTGCTTGGGGTGTACATTTTAGGGATCGTCACCGCCTTTGGCGGAGGGGCAGTGCGCAATTTGTTGATCGGGATTC
CTGTATCCGCGTTATGGCAACAAGGTCCGCTTTTTCTTGTCGCCTTAGCTTCGATGACTGTTGTGTATTTGTTCCCAAAA
CAAATGCTCCCGCCGTGGAAGCGATGGGGCAACTTTTTTGATGCTCTCGGGCTGTCAGCGTTTTCCATTCAAGGAGCACT
GTATGCCGTGAACATGGGACATCCGTTAAGCGCAGTCATCGTCGCCGCTGTGTTGACCGGTAGCGGCGGCGGCATCATCC
GCGATGTGTTGGCGGGAAGAAAGCCGCTTGTGTTGCGCTCGGAAATCTACGCCGTCTGGGCGATTTTAGCCGGTCTCGCT
ATCGGATTGAAATGGACAGAGTCGCCAGTGGAACTGTATGTACTGTTTACTGTCGTCGCCGCCCTTCGTATTTTGTCGTA
CACATATGGCTGGAAACTGCCGCGCCGAGCGGTTGGAGGAGAGTGA

Upstream 100 bases:

>100_bases
CCAGCTGCCACCCTGCCAGTTCGTTCAAAAAATGATTGATTTCCCGCCGTTTTTGCCCCTACAATGATACAGGAAAACAG
CATGGAAAGGAACAGCGAGA

Downstream 100 bases:

>100_bases
TTGAAAACATGACCGTTCTTTCAATATTGTCTTCCATTTTTCAATTTTTGTAATCCTTATTCGAACATCCCCTTCAATTA
GTGATGACGATATACGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTWEVLSIIGTIAFAISGAIVAMEEEYDLLGVYILGIVTAFGGGAVRNLLIGIPVSALWQQGPLFLVALASMTVVYLFPK
QMLPPWKRWGNFFDALGLSAFSIQGALYAVNMGHPLSAVIVAAVLTGSGGGIIRDVLAGRKPLVLRSEIYAVWAILAGLA
IGLKWTESPVELYVLFTVVAALRILSYTYGWKLPRRAVGGE

Sequences:

>Translated_201_residues
MTWEVLSIIGTIAFAISGAIVAMEEEYDLLGVYILGIVTAFGGGAVRNLLIGIPVSALWQQGPLFLVALASMTVVYLFPK
QMLPPWKRWGNFFDALGLSAFSIQGALYAVNMGHPLSAVIVAAVLTGSGGGIIRDVLAGRKPLVLRSEIYAVWAILAGLA
IGLKWTESPVELYVLFTVVAALRILSYTYGWKLPRRAVGGE
>Mature_200_residues
TWEVLSIIGTIAFAISGAIVAMEEEYDLLGVYILGIVTAFGGGAVRNLLIGIPVSALWQQGPLFLVALASMTVVYLFPKQ
MLPPWKRWGNFFDALGLSAFSIQGALYAVNMGHPLSAVIVAAVLTGSGGGIIRDVLAGRKPLVLRSEIYAVWAILAGLAI
GLKWTESPVELYVLFTVVAALRILSYTYGWKLPRRAVGGE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=152, Percent_Identity=38.1578947368421, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=35.8585858585859, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21554; Mature: 21423

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWEVLSIIGTIAFAISGAIVAMEEEYDLLGVYILGIVTAFGGGAVRNLLIGIPVSALWQ
CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHC
QGPLFLVALASMTVVYLFPKQMLPPWKRWGNFFDALGLSAFSIQGALYAVNMGHPLSAVI
CCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCHHEEECCEEEEEECCCCHHHHH
VAAVLTGSGGGIIRDVLAGRKPLVLRSEIYAVWAILAGLAIGLKWTESPVELYVLFTVVA
HHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ALRILSYTYGWKLPRRAVGGE
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TWEVLSIIGTIAFAISGAIVAMEEEYDLLGVYILGIVTAFGGGAVRNLLIGIPVSALWQ
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHC
QGPLFLVALASMTVVYLFPKQMLPPWKRWGNFFDALGLSAFSIQGALYAVNMGHPLSAVI
CCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCHHEEECCEEEEEECCCCHHHHH
VAAVLTGSGGGIIRDVLAGRKPLVLRSEIYAVWAILAGLAIGLKWTESPVELYVLFTVVA
HHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ALRILSYTYGWKLPRRAVGGE
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]