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The map label for this gene is yjdJ [H]

Identifier: 138894841

GI number: 138894841

Start: 1247930

End: 1248562

Strand: Reverse

Name: yjdJ [H]

Synonym: GTNG_1177

Alternate gene names: 138894841

Gene position: 1248562-1247930 (Counterclockwise)

Preceding gene: 138894842

Following gene: 138894829

Centisome position: 35.17

GC content: 47.39

Gene sequence:

>633_bases
ATGTCGGTTCATCGTTCTCCCATCCATCTTGACACAATCCGATCGTTTCTAGGACATCCAGCAGGGATGATTATTTCGGC
GAATCAGACACATGTCTTCTCCCTGCGCGTTCATCGTAATAAAGGCGCATGGAAGCAAAATTGCTTATATGAAAAGGAGG
AGACCATCGATATGTATCGACTCATCCAATTCGGCGTCGTTGCGATGATTTGGTTCTTTTCTGCTTTAGTATCTTGGTAT
GAAGGAAGCGCGATTCTCGACGATCCTTGGGAATGGAAATACTCAACGCCATTTTCACACTGGCTCGCCGGCCCAGTAGT
TCATGAGCACGACATTTCTCAGCTTGACTATTTCGTATATGCCGCCAAATTCCGCCCTGTTTTTCCAAGTTTGCTCATCG
TTTGCACCGTCTATTTGCTTATTCTCGCTGCATCTTATTTGAATCAACGCACATTTGCCTATGTGTTGTTTGTCTTCAGT
GCAACGCTTCCTGGGCTTGCGCTTCCTTTCATGGATGCGACGACAACGGGCGGAACATGGCTAGCGATCGTTTTGTCCGG
ATGCGCCCTCGTATGCGCGGCACTCGGAGCAATGACCATCAAAAACCATTCCGTTCGACAAGCAAAATCGTAA

Upstream 100 bases:

>100_bases
AGCAACTTTTTCTTTATGACAACGGGCCGGCTTTGCCCGACGAATGGCATCGGTGCATTCGACTTTCACATAAGCACGAT
CTTCCAAGAGCGTTTGTTGG

Downstream 100 bases:

>100_bases
GCATGAAGGCGAAGACGCCCAATGCAGGCGCTTCGCTTTTTGTTTCGTATTCCTTCTTACGCGCTTTGCTCGCTTCGCAC
GGCCACTACGACCCCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSVHRSPIHLDTIRSFLGHPAGMIISANQTHVFSLRVHRNKGAWKQNCLYEKEETIDMYRLIQFGVVAMIWFFSALVSWY
EGSAILDDPWEWKYSTPFSHWLAGPVVHEHDISQLDYFVYAAKFRPVFPSLLIVCTVYLLILAASYLNQRTFAYVLFVFS
ATLPGLALPFMDATTTGGTWLAIVLSGCALVCAALGAMTIKNHSVRQAKS

Sequences:

>Translated_210_residues
MSVHRSPIHLDTIRSFLGHPAGMIISANQTHVFSLRVHRNKGAWKQNCLYEKEETIDMYRLIQFGVVAMIWFFSALVSWY
EGSAILDDPWEWKYSTPFSHWLAGPVVHEHDISQLDYFVYAAKFRPVFPSLLIVCTVYLLILAASYLNQRTFAYVLFVFS
ATLPGLALPFMDATTTGGTWLAIVLSGCALVCAALGAMTIKNHSVRQAKS
>Mature_209_residues
SVHRSPIHLDTIRSFLGHPAGMIISANQTHVFSLRVHRNKGAWKQNCLYEKEETIDMYRLIQFGVVAMIWFFSALVSWYE
GSAILDDPWEWKYSTPFSHWLAGPVVHEHDISQLDYFVYAAKFRPVFPSLLIVCTVYLLILAASYLNQRTFAYVLFVFSA
TLPGLALPFMDATTTGGTWLAIVLSGCALVCAALGAMTIKNHSVRQAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016508 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23651; Mature: 23520

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHRSPIHLDTIRSFLGHPAGMIISANQTHVFSLRVHRNKGAWKQNCLYEKEETIDMYR
CCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHH
LIQFGVVAMIWFFSALVSWYEGSAILDDPWEWKYSTPFSHWLAGPVVHEHDISQLDYFVY
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
AAKFRPVFPSLLIVCTVYLLILAASYLNQRTFAYVLFVFSATLPGLALPFMDATTTGGTW
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LAIVLSGCALVCAALGAMTIKNHSVRQAKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
SVHRSPIHLDTIRSFLGHPAGMIISANQTHVFSLRVHRNKGAWKQNCLYEKEETIDMYR
CCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHH
LIQFGVVAMIWFFSALVSWYEGSAILDDPWEWKYSTPFSHWLAGPVVHEHDISQLDYFVY
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
AAKFRPVFPSLLIVCTVYLLILAASYLNQRTFAYVLFVFSATLPGLALPFMDATTTGGTW
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LAIVLSGCALVCAALGAMTIKNHSVRQAKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]