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The map label for this gene is mmgC [H]

Identifier: 138894835

GI number: 138894835

Start: 1240860

End: 1242008

Strand: Direct

Name: mmgC [H]

Synonym: GTNG_1171

Alternate gene names: 138894835

Gene position: 1240860-1242008 (Clockwise)

Preceding gene: 138894834

Following gene: 138894836

Centisome position: 34.95

GC content: 52.92

Gene sequence:

>1149_bases
ATGGTGACAGCCCGCTATTTGCGAGAAGAGCACCACATCTTCCGCGAGGCATTCCGCAAGTTTTTGGAGAAAGAGGCATA
TCCGTATTATGACGAATGGGAACAACGCGGCATCATTCCGCGGTCGTTTTGGGCGAAAATGGGAGAAAACGGTTTTCTTT
GCCCATGGGTGGATGAGAAGTATGGGGGGTTAAACGCCGATTTTGCCTATTCGGTCGTCATCAATGAAGAGTTGGAAAAA
GTCGGTTCAAGCCTTGTCGGCATTGGACTGCATAACGATATTGTGACACCGTATATCGCGTCGTATGGAACCGAAGAGCA
AAAGCAAAAATGGCTGCCGAAATGCATAAGCGGCGAGCTCATTACAGCGATCGCCATGACTGAGCCGGGAGCTGGGTCGG
ATTTAGCGAACATTTCGACAACGGCGGTCAAAGCCGGTGACTACTACATCGTCAACGGGCAAAAAACGTTTATTACAAAC
GGCATTCATGCCGATTTGATCGTCGTCGCTTGCAAAACTGATCCGCACGCGAAACCGCCGCATCGCGGCATTAGTCTGTT
GGTCGTTGAACGTGACACGCCGGGGTTTACGCGCGGGCGGAAGCTCGAGAAAGTCGGGCTGCACGCCCAAGATACGGCGG
AGCTGTTTTTCCAAGATGCGAAAGTGCCGAAAGAAAACTTGCTTGGGGAGGAAGGAAAAGGGTTTTACTATTTGATGGAA
AAGCTCCAGCAGGAGCGGCTCGTGGTCGCCATCGCCGCTCAAACGGCGGCCGAAGTGATGTTTTCGTTGGCGAAGCACTA
TGTAAAGCAGCGTTCAGCGTTCGGCAGGCGGGTGAGCGAGTTTCAAACCGTTCAGTTCCGCCTTGCCGAAATGGCGACTG
ACATCGCCATCGGGCGCACGTTTGTCGATCGTGTCATCGAGGAGCATATGGCCGGAAAACAAATTGTGACGGAAGTATCG
ATGGCGAAATGGTGGATCACGGAGATGGCGAAACGTGTCGCGGCTGAAGCCATGCAGCTCCACGGCGGCTACGGCTATAT
GGAAGAATACGAGATCGCTCGGCGCTATCGCGATATTCCAGTGAGCGCCATTTACGCCGGAACGAACGAGATGATGAAAA
CGATCATCGCCCGGCAGCTAGACTTATAG

Upstream 100 bases:

>100_bases
CGCGAGCGGCAAAATTCAAAAGTTTTTGCTGCGCGAGCGGCTGAAACAGCAGGCGGCGGGCGGGACAAACAAGCAGTGAC
AGAACGGAAAAGAGGGATAC

Downstream 100 bases:

>100_bases
AAAGAGGGACACACCATGCTGAATGGCGTTGTTGTGCTTGACTTTTCTCATTACTTGCCCGGCCCGTTTGCGAGCTGGCG
TCTTGCCCAGCTTGGAGCCG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MVTARYLREEHHIFREAFRKFLEKEAYPYYDEWEQRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEK
VGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGELITAIAMTEPGAGSDLANISTTAVKAGDYYIVNGQKTFITN
GIHADLIVVACKTDPHAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLME
KLQQERLVVAIAAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIVTEVS
MAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLDL

Sequences:

>Translated_382_residues
MVTARYLREEHHIFREAFRKFLEKEAYPYYDEWEQRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEK
VGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGELITAIAMTEPGAGSDLANISTTAVKAGDYYIVNGQKTFITN
GIHADLIVVACKTDPHAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLME
KLQQERLVVAIAAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIVTEVS
MAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLDL
>Mature_382_residues
MVTARYLREEHHIFREAFRKFLEKEAYPYYDEWEQRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEK
VGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGELITAIAMTEPGAGSDLANISTTAVKAGDYYIVNGQKTFITN
GIHADLIVVACKTDPHAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLME
KLQQERLVVAIAAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRTFVDRVIEEHMAGKQIVTEVS
MAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=47.0744680851064, Blast_Score=360, Evalue=1e-99,
Organism=Homo sapiens, GI226958412, Length=379, Percent_Identity=35.8839050131926, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226958414, Length=350, Percent_Identity=36.8571428571429, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI4557233, Length=375, Percent_Identity=35.2, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=34.8404255319149, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=32.3529411764706, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=34.7593582887701, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI4557231, Length=373, Percent_Identity=34.8525469168901, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=33.9031339031339, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI76496475, Length=379, Percent_Identity=32.7176781002639, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI4557235, Length=379, Percent_Identity=32.7176781002639, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI4503943, Length=387, Percent_Identity=27.6485788113695, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI7669494, Length=372, Percent_Identity=27.6881720430108, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI48976061, Length=287, Percent_Identity=32.0557491289199, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI211971008, Length=287, Percent_Identity=32.0557491289199, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI38505218, Length=287, Percent_Identity=26.4808362369338, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI218563752, Length=265, Percent_Identity=27.9245283018868, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081958, Length=377, Percent_Identity=31.2997347480106, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786223, Length=377, Percent_Identity=29.1777188328912, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI87082384, Length=305, Percent_Identity=27.2131147540984, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081702, Length=358, Percent_Identity=24.0223463687151, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=382, Percent_Identity=36.1256544502618, Blast_Score=249, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=33.9622641509434, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=34.5744680851064, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17533517, Length=367, Percent_Identity=36.2397820163488, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17508101, Length=377, Percent_Identity=32.3607427055703, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17505929, Length=371, Percent_Identity=32.0754716981132, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=32.1808510638298, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=34.6049046321526, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=377, Percent_Identity=32.6259946949602, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71990804, Length=280, Percent_Identity=35.3571428571429, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71985184, Length=360, Percent_Identity=32.2222222222222, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=35.8078602620087, Blast_Score=150, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=29.3650793650794, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71982178, Length=278, Percent_Identity=30.5755395683453, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71985192, Length=312, Percent_Identity=31.4102564102564, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17531909, Length=244, Percent_Identity=29.0983606557377, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17562446, Length=267, Percent_Identity=29.9625468164794, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=27.8388278388278, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=27.8388278388278, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17531913, Length=179, Percent_Identity=26.8156424581006, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=35.7142857142857, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=35.2480417754569, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=31.1827956989247, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=30.2139037433155, Blast_Score=204, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI281363737, Length=298, Percent_Identity=33.5570469798658, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI19920834, Length=384, Percent_Identity=27.6041666666667, Blast_Score=127, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43258; Mature: 43258

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTARYLREEHHIFREAFRKFLEKEAYPYYDEWEQRGIIPRSFWAKMGENGFLCPWVDEK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCCCCC
YGGLNADFAYSVVINEELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGEL
CCCCCCCEEEEEEEHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCC
ITAIAMTEPGAGSDLANISTTAVKAGDYYIVNGQKTFITNGIHADLIVVACKTDPHAKPP
EEEEEECCCCCCCCCCCCHHHEEECCCEEEECCCEEEEECCCCEEEEEEEECCCCCCCCC
HRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLME
CCCEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHH
KLQQERLVVAIAAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRT
HHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
VSAIYAGTNEMMKTIIARQLDL
CEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTARYLREEHHIFREAFRKFLEKEAYPYYDEWEQRGIIPRSFWAKMGENGFLCPWVDEK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCCCCC
YGGLNADFAYSVVINEELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCISGEL
CCCCCCCEEEEEEEHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCC
ITAIAMTEPGAGSDLANISTTAVKAGDYYIVNGQKTFITNGIHADLIVVACKTDPHAKPP
EEEEEECCCCCCCCCCCCHHHEEECCCEEEECCCEEEEECCCCEEEEEEEECCCCCCCCC
HRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPKENLLGEEGKGFYYLME
CCCEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHH
KLQQERLVVAIAAQTAAEVMFSLAKHYVKQRSAFGRRVSEFQTVQFRLAEMATDIAIGRT
HHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
VSAIYAGTNEMMKTIIARQLDL
CEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]