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The map label for this gene is yurN [H]

Identifier: 138894495

GI number: 138894495

Start: 900193

End: 901092

Strand: Direct

Name: yurN [H]

Synonym: GTNG_0825

Alternate gene names: 138894495

Gene position: 900193-901092 (Clockwise)

Preceding gene: 138894494

Following gene: 138894496

Centisome position: 25.36

GC content: 44.89

Gene sequence:

>900_bases
ATGAAGCAGACATTCACGAAAAAAATGTGGCGGGAAACAGGATCGGCTTATTTTCTGTTATCTCCGGCTTTATTTGTGCT
TCTTTTATTCATTATCGGCCCGATCGTGTTCGCAGTTTTTTTGGCATTTCATAAAGTGCAATTGTTAGGAACGACATCGT
TCGAGTTCGTCGGACTCGATAACTTCGCCCGCATAGCTAACGATACGAGGGCGAAAATCGCGCTATGGAACACGCTGAAA
TATGTAGCGATTGTCGTTCCGTGTCAAACGATTTTAGCGCTTGTGTTAGCCGCTACTTTAAACGCCGGGTTGAAAGGGCA
AAAATTTTTCCGCATCGTTTACTTTTTACCGACCCTGACTTCTTCAGCAGTATTGACCCTTATTTTCATGTGGATGTACA
ACCAAAACGGCTTCATTAACCATGTGCTTGAAGCGGTTGGGTTGCCGACGTACAATTGGCTCGGCGATCCGGACGTCGCT
TTAAATGCGATCATGATCATGAACATTTGGTCAACGGCCCCGTACTTTATGGTCATTTATTTGGCGGCATTGCAAGATAT
TCCAGATTCCTTGTACGAAGCAGTCGAATTAGACGGGGCCAACGCTTGGCAGAAGTTTTGGCACATCACTGTTCCGTATT
TGCGCCCGGTCACATCGTTTGTTGTGGTTATGGGGCTGATCGGTACTTTCCAATTGTTTGATCAATCGTACATTTTCTCA
GCCGGTTCTGGTGGGCCGAACAATTCTACGTTAACTGTTGTGCTTCTTATTTACCAATATGCGTTTAAAACGTTAGGAAC
GATGGGATACGCTGCTGCGTTGGCATTTGCGTTGGCCATCATTATTTTAATCGCGACATTAATCCAGCGGAAGCTATCGA
AAGAGGAGTCCCTTTATTAA

Upstream 100 bases:

>100_bases
CAGCTTCTGCCGGAGAGCTGTTCCTTTCTTTCTAACAGCGGCTTTGTGGCCGCGTTAGAAAGAGGGGAATAGCGATTCGA
TTGCAAGGGGATGAAAAAGG

Downstream 100 bases:

>100_bases
GGAGTTGAGGACGAATGAAAAGAAAAATAGGAATTGGGAAAGCGCTGCTGTATGTTGTACTTGTTATGTATGCGATCATT
ACGCTGATTCCGTTTTTATG

Product: sugar transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKQTFTKKMWRETGSAYFLLSPALFVLLLFIIGPIVFAVFLAFHKVQLLGTTSFEFVGLDNFARIANDTRAKIALWNTLK
YVAIVVPCQTILALVLAATLNAGLKGQKFFRIVYFLPTLTSSAVLTLIFMWMYNQNGFINHVLEAVGLPTYNWLGDPDVA
LNAIMIMNIWSTAPYFMVIYLAALQDIPDSLYEAVELDGANAWQKFWHITVPYLRPVTSFVVVMGLIGTFQLFDQSYIFS
AGSGGPNNSTLTVVLLIYQYAFKTLGTMGYAAALAFALAIIILIATLIQRKLSKEESLY

Sequences:

>Translated_299_residues
MKQTFTKKMWRETGSAYFLLSPALFVLLLFIIGPIVFAVFLAFHKVQLLGTTSFEFVGLDNFARIANDTRAKIALWNTLK
YVAIVVPCQTILALVLAATLNAGLKGQKFFRIVYFLPTLTSSAVLTLIFMWMYNQNGFINHVLEAVGLPTYNWLGDPDVA
LNAIMIMNIWSTAPYFMVIYLAALQDIPDSLYEAVELDGANAWQKFWHITVPYLRPVTSFVVVMGLIGTFQLFDQSYIFS
AGSGGPNNSTLTVVLLIYQYAFKTLGTMGYAAALAFALAIIILIATLIQRKLSKEESLY
>Mature_299_residues
MKQTFTKKMWRETGSAYFLLSPALFVLLLFIIGPIVFAVFLAFHKVQLLGTTSFEFVGLDNFARIANDTRAKIALWNTLK
YVAIVVPCQTILALVLAATLNAGLKGQKFFRIVYFLPTLTSSAVLTLIFMWMYNQNGFINHVLEAVGLPTYNWLGDPDVA
LNAIMIMNIWSTAPYFMVIYLAALQDIPDSLYEAVELDGANAWQKFWHITVPYLRPVTSFVVVMGLIGTFQLFDQSYIFS
AGSGGPNNSTLTVVLLIYQYAFKTLGTMGYAAALAFALAIIILIATLIQRKLSKEESLY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=298, Percent_Identity=28.8590604026846, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1787570, Length=268, Percent_Identity=33.5820895522388, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1790465, Length=244, Percent_Identity=31.1475409836066, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33384; Mature: 33384

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTFTKKMWRETGSAYFLLSPALFVLLLFIIGPIVFAVFLAFHKVQLLGTTSFEFVGLD
CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCH
NFARIANDTRAKIALWNTLKYVAIVVPCQTILALVLAATLNAGLKGQKFFRIVYFLPTLT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SSAVLTLIFMWMYNQNGFINHVLEAVGLPTYNWLGDPDVALNAIMIMNIWSTAPYFMVIY
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LAALQDIPDSLYEAVELDGANAWQKFWHITVPYLRPVTSFVVVMGLIGTFQLFDQSYIFS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGSGGPNNSTLTVVLLIYQYAFKTLGTMGYAAALAFALAIIILIATLIQRKLSKEESLY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQTFTKKMWRETGSAYFLLSPALFVLLLFIIGPIVFAVFLAFHKVQLLGTTSFEFVGLD
CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCH
NFARIANDTRAKIALWNTLKYVAIVVPCQTILALVLAATLNAGLKGQKFFRIVYFLPTLT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SSAVLTLIFMWMYNQNGFINHVLEAVGLPTYNWLGDPDVALNAIMIMNIWSTAPYFMVIY
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LAALQDIPDSLYEAVELDGANAWQKFWHITVPYLRPVTSFVVVMGLIGTFQLFDQSYIFS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGSGGPNNSTLTVVLLIYQYAFKTLGTMGYAAALAFALAIIILIATLIQRKLSKEESLY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]