| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is gltX [H]
Identifier: 138893762
GI number: 138893762
Start: 101498
End: 102967
Strand: Direct
Name: gltX [H]
Synonym: GTNG_0083
Alternate gene names: 138893762
Gene position: 101498-102967 (Clockwise)
Preceding gene: 138893761
Following gene: 138893763
Centisome position: 2.86
GC content: 50.34
Gene sequence:
>1470_bases ATGGCAAAAAACGTGCGCGTGCGCTATGCGCCGAGCCCGACTGGCCATTTGCATATCGGTGGGGCACGGACAGCGCTGTT TAACTATTTGTTTGCCCGCCATTACGGCGGAAAAATGGTCGTCCGCATCGAAGATACGGATATTGAACGGAACGTTGAAG GCGGCGAAGAGTCGCAGCTTGAAAACTTAAAATGGCTTGGCATCGATTATGACGAATCGATTGATAAGGACGGCGGATAT GGGCCGTATCGTCAGACGGAACGGCTCGATATCTATCGGAAGTATGTGAACGAGCTGCTTGAACAAGGGCATGCGTATAA ATGTTTTTGTACACCGGAAGAGCTCGAGCGGGAACGTGAGGAGCAACGGGCGGCAGGTATTGCTGCTCCGCAATACAGCG GCAAATGCCGCCATTTAACGCCGGAGCAAGTTGCCGAGCTTGAAGCACAAGGAAAACCGTATACGATCCGCTTGAAAGTG CCGGAAGGGAAAACGTATGAAGTAGATGATTTAGTGCGCGGTAAAGTGACGTTTGAATCGAAAGACATCGGCGATTGGGT CATTGTGAAGGCGAACGGTATTCCGACGTACAACTTTGCCGTTGTCATTGATGACCATTTGATGGAAATCAGCCATGTGT TCCGCGGTGAGGAGCATTTATCCAACACGCCGAAACAGCTAATGGTGTACGAATATTTCGGTTGGGAGCCACCGCAATTC GCCCATATGACATTGATTGTCAACGAGCAGCGGAAAAAGCTATCCAAGCGCGATGAATCGATTATTCAGTTCGTGTCGCA ATATAAAGAGCTCGGCTATTTGCCGGAGGCGATGTTCAACTTTTTCGCCCTTCTTGGCTGGTCGCCGGAAGGAGAAGAAG AAATTTTTACGAAGGACGAGCTCATCCGCATTTTTGATGTCGCCCGGCTGTCGAAATCGCCGTCGATGTTTGATACGAAA AAGCTGACATGGATGAACAACCAATATATCAAAAAGCTGGATCTCGACAGGCTTGTCGAGCTGGCGTTGCCGCATTTAGT GAAAGCCGGACGCCTGCCGGCAGATATGAGTGATGAGCAGCGGCAATGGGCACGCGATTTAATTGCCTTGTACCAAGAGC AAATGAGCTACGGTGCGGAGATCGTTTCGCTGTCCGAGCTGTTCTTTAAAGAAGAAGTCGAATACGAAGACGAAGCCCGC CAAGTGCTCGCCGAAGAACAAGTACCGGATGTGCTCTCCGCCTTTTTGGCGAATGTGCGTGAGCTTGAGCCGTTTACGGC GGATGAGATTAAAGCAGCGATCAAAGCAGTGCAAAAATCGACAGGGCAAAAAGGCAAGAAGCTGTTTATGCCGATTCGCG CCGCAGTGACTGGGCAAACACACGGACCGGAACTGCCGTTTGCCATCCAACTGCTTGGCAAACAAAAGGTGATTGAACGG CTCGAACGGGCACTGCATGAAAAATTTTAA
Upstream 100 bases:
>100_bases AGCGGCATGGTGCCGCTAAGGTGAGCCTTCCGTTTTGAACTTTGCCACGATAAACGGTACAATAATAGCACAAGCTTTGA TGGAATTGGAGGTTTGGACG
Downstream 100 bases:
>100_bases TCAGTCTTTTATGCACGTTTGTTTTGTAGCTGTGGTATAATAATAAAAAGTTTTTGGCTGAACAAGTACACATCATGACA AAGCGTTGACGAGGAGAAGT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MAKNVRVRYAPSPTGHLHIGGARTALFNYLFARHYGGKMVVRIEDTDIERNVEGGEESQLENLKWLGIDYDESIDKDGGY GPYRQTERLDIYRKYVNELLEQGHAYKCFCTPEELEREREEQRAAGIAAPQYSGKCRHLTPEQVAELEAQGKPYTIRLKV PEGKTYEVDDLVRGKVTFESKDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFGWEPPQF AHMTLIVNEQRKKLSKRDESIIQFVSQYKELGYLPEAMFNFFALLGWSPEGEEEIFTKDELIRIFDVARLSKSPSMFDTK KLTWMNNQYIKKLDLDRLVELALPHLVKAGRLPADMSDEQRQWARDLIALYQEQMSYGAEIVSLSELFFKEEVEYEDEAR QVLAEEQVPDVLSAFLANVRELEPFTADEIKAAIKAVQKSTGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIER LERALHEKF
Sequences:
>Translated_489_residues MAKNVRVRYAPSPTGHLHIGGARTALFNYLFARHYGGKMVVRIEDTDIERNVEGGEESQLENLKWLGIDYDESIDKDGGY GPYRQTERLDIYRKYVNELLEQGHAYKCFCTPEELEREREEQRAAGIAAPQYSGKCRHLTPEQVAELEAQGKPYTIRLKV PEGKTYEVDDLVRGKVTFESKDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFGWEPPQF AHMTLIVNEQRKKLSKRDESIIQFVSQYKELGYLPEAMFNFFALLGWSPEGEEEIFTKDELIRIFDVARLSKSPSMFDTK KLTWMNNQYIKKLDLDRLVELALPHLVKAGRLPADMSDEQRQWARDLIALYQEQMSYGAEIVSLSELFFKEEVEYEDEAR QVLAEEQVPDVLSAFLANVRELEPFTADEIKAAIKAVQKSTGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIER LERALHEKF >Mature_488_residues AKNVRVRYAPSPTGHLHIGGARTALFNYLFARHYGGKMVVRIEDTDIERNVEGGEESQLENLKWLGIDYDESIDKDGGYG PYRQTERLDIYRKYVNELLEQGHAYKCFCTPEELEREREEQRAAGIAAPQYSGKCRHLTPEQVAELEAQGKPYTIRLKVP EGKTYEVDDLVRGKVTFESKDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFGWEPPQFA HMTLIVNEQRKKLSKRDESIIQFVSQYKELGYLPEAMFNFFALLGWSPEGEEEIFTKDELIRIFDVARLSKSPSMFDTKK LTWMNNQYIKKLDLDRLVELALPHLVKAGRLPADMSDEQRQWARDLIALYQEQMSYGAEIVSLSELFFKEEVEYEDEARQ VLAEEQVPDVLSAFLANVRELEPFTADEIKAAIKAVQKSTGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIERL ERALHEKF
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=498, Percent_Identity=33.9357429718875, Blast_Score=258, Evalue=7e-69, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=37.7319587628866, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI226510925, Length=256, Percent_Identity=34.375, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=34.639175257732, Blast_Score=271, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6324540, Length=507, Percent_Identity=35.1084812623274, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321192, Length=224, Percent_Identity=29.4642857142857, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324742, Length=308, Percent_Identity=23.7012987012987, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI24665321, Length=502, Percent_Identity=36.6533864541833, Blast_Score=302, Evalue=4e-82,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56325; Mature: 56194
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNVRVRYAPSPTGHLHIGGARTALFNYLFARHYGGKMVVRIEDTDIERNVEGGEESQL CCCCCEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHH ENLKWLGIDYDESIDKDGGYGPYRQTERLDIYRKYVNELLEQGHAYKCFCTPEELERERE CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH EQRAAGIAAPQYSGKCRHLTPEQVAELEAQGKPYTIRLKVPEGKTYEVDDLVRGKVTFES HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHCCEEEECC KDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFGWEPPQF CCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHCCHHHHCCCCHHEEEEEECCCCCCCC AHMTLIVNEQRKKLSKRDESIIQFVSQYKELGYLPEAMFNFFALLGWSPEGEEEIFTKDE EEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LIRIFDVARLSKSPSMFDTKKLTWMNNQYIKKLDLDRLVELALPHLVKAGRLPADMSDEQ HHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHH RQWARDLIALYQEQMSYGAEIVSLSELFFKEEVEYEDEARQVLAEEQVPDVLSAFLANVR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH ELEPFTADEIKAAIKAVQKSTGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIER HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LERALHEKF HHHHHHHCC >Mature Secondary Structure AKNVRVRYAPSPTGHLHIGGARTALFNYLFARHYGGKMVVRIEDTDIERNVEGGEESQL CCCCEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHH ENLKWLGIDYDESIDKDGGYGPYRQTERLDIYRKYVNELLEQGHAYKCFCTPEELERERE CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH EQRAAGIAAPQYSGKCRHLTPEQVAELEAQGKPYTIRLKVPEGKTYEVDDLVRGKVTFES HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHCCEEEECC KDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFGWEPPQF CCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHCCHHHHCCCCHHEEEEEECCCCCCCC AHMTLIVNEQRKKLSKRDESIIQFVSQYKELGYLPEAMFNFFALLGWSPEGEEEIFTKDE EEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LIRIFDVARLSKSPSMFDTKKLTWMNNQYIKKLDLDRLVELALPHLVKAGRLPADMSDEQ HHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHH RQWARDLIALYQEQMSYGAEIVSLSELFFKEEVEYEDEARQVLAEEQVPDVLSAFLANVR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH ELEPFTADEIKAAIKAVQKSTGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIER HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LERALHEKF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA