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The map label for this gene is yhbY [C]

Identifier: 134302461

GI number: 134302461

Start: 1514130

End: 1514408

Strand: Reverse

Name: yhbY [C]

Synonym: FTW_1609

Alternate gene names: 134302461

Gene position: 1514408-1514130 (Counterclockwise)

Preceding gene: 134302462

Following gene: 134302460

Centisome position: 79.77

GC content: 33.33

Gene sequence:

>279_bases
ATGGATGTAAAACAACAACAAAAATTAAAAGCTCAAGCACATAGCTTAAAACCTGTTGTACTAATGGGTGAGAAAGGCCT
AACAGAAAATGTAATCTTAGAGATTGACTTGGCTTTGGCATCACATCAATTAATAAAAGTAAAAGTCGGTCGTTTGCCTA
AAGAAGAGAAGCAACAAATTGCTAGTGAAATTACTCAGGCGACAAGGTTAGAGCTTGTACAGATTATTGGTAATATTCTA
GTCTTATACAGAAGAAATCCAAACAAAGAAAAAATATAG

Upstream 100 bases:

>100_bases
GCGCTAGAGGCACAAAGTTACTTTGTAAAATTTAAAAATGTAGACAAAGAATTAATCTTAGAAAACTTAATATTAGAAAT
TATAAAATAGGTAAAATAAC

Downstream 100 bases:

>100_bases
GTGAAATATGAGCTTTCCAATATCACGTCCACGTAGACTTAGGGTTACACAAGCTTTTCGCGATATCGTTGCTGAGACAA
CTTTAAGCCTTGATGACTTA

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATRLELVQIIGNIL
VLYRRNPNKEKI

Sequences:

>Translated_92_residues
MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATRLELVQIIGNIL
VLYRRNPNKEKI
>Mature_92_residues
MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATRLELVQIIGNIL
VLYRRNPNKEKI

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=91, Percent_Identity=50.5494505494505, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10419; Mature: 10419

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQI
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEHHHCCHHEEEECCCCCHHHHHHH
ASEITQATRLELVQIIGNILVLYRRNPNKEKI
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
>Mature Secondary Structure
MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQI
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEHHHCCHHEEEECCCCCHHHHHHH
ASEITQATRLELVQIIGNILVLYRRNPNKEKI
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]