Click here to switch to the map view.

The map label for this gene is potH [H]

Identifier: 134302338

GI number: 134302338

Start: 1356886

End: 1357767

Strand: Direct

Name: potH [H]

Synonym: FTW_1454

Alternate gene names: 134302338

Gene position: 1356886-1357767 (Clockwise)

Preceding gene: 134302337

Following gene: 134302339

Centisome position: 71.47

GC content: 33.22

Gene sequence:

>882_bases
ATGCAAAACTTAGAAAAAAGCTTTAGACATACTTTAGTTTATCTAATTCCTTTTATATGGTTTGTAGTTTTTCTGCTTAT
ACCATTTTTATTTGTCGTAGGTATTAGCTTTACTTTACCCGCTGATGGTACTCCGCCTGTTACTTCGTTGATGACTTATA
AACAATCAGCACTACACTTTACGCTATATCTAAGTAATTATATTGAGCTGATTCATTATAATCTAATATTCATATCATTA
CTTAAATCTTTTAAAGTTGCTTTTATAACTACAGTATTGTGTATTTTAATCGGTTATCCGATGGCATTAGCATTATCAAA
AGCCAAAAAGAACACCCAGATTTTCTTTTTAGTTCTAATTATCATTCCATACTGGACCTCATTTCTACTTAGAACATATG
CGTGGGTGACATTACTAGGTAACCATACCTTAAATCAATTTCTAATGGATTTAGGCTTACCAAGCATGGCTTTACTTTAC
AATGATTTTTCGATGTATTTAGGTATGGTTTATTGTTACTTACCATTTCTAGTGTTACCACTGTATAGCACTCTAATTAA
AATCGATCCTAGTATCTATGATGCTGCTGAGGATTTAGGCTCTAGGCCGATTAATTCTTTCTTTAAGATAACACTACCAT
TATCAATGCCTGGGCTAATTGCTGGCAGCTTGTTAATATTTATCCCGGCTATTGGTGAAGTAGTTGTGCCACAAATTATG
GGTGGTATGGATTCATTAATGATTGGTAATGTTATTTGGGAAGAGTTTTTCACATCTAATAATTGGGGTATGGCAGCTGC
GATATCCGTAGTTTTAATAGTTATACTAGTTTTACCTATCCTATGGATGCAACGCATTCAAGCAAAGCGAACTTTTGTTT
AG

Upstream 100 bases:

>100_bases
CTACTGACTTCAATATTGAGAGAAATGCAGATCATCCTTCTTGGGATGATGAAGTATATCTCACTTGGGAATCAGAAAAT
ATCATGGTGCTATACTCATA

Downstream 100 bases:

>100_bases
GAGGATATGAGCGATGAAAAGATTTTCATTTAGTAAGATAATGCTTATATTAGGTTTGATCTTTTTATATATTCCACTAA
TAATTTTAGTGGTTTTCTCA

Product: ABC transporter, permease protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAAAISVVLIVILVLPILWMQRIQAKRTFV

Sequences:

>Translated_293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAAAISVVLIVILVLPILWMQRIQAKRTFV
>Mature_293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAAAISVVLIVILVLPILWMQRIQAKRTFV

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=292, Percent_Identity=43.4931506849315, Blast_Score=246, Evalue=9e-67,
Organism=Escherichia coli, GI1787369, Length=265, Percent_Identity=36.2264150943396, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787713, Length=224, Percent_Identity=29.9107142857143, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33243; Mature: 33243

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]