Click here to switch to the map view.

The map label for this gene is potI [H]

Identifier: 134302339

GI number: 134302339

Start: 1357781

End: 1358587

Strand: Direct

Name: potI [H]

Synonym: FTW_1455

Alternate gene names: 134302339

Gene position: 1357781-1358587 (Clockwise)

Preceding gene: 134302338

Following gene: 134302340

Centisome position: 71.52

GC content: 33.09

Gene sequence:

>807_bases
ATGAAAAGATTTTCATTTAGTAAGATAATGCTTATATTAGGTTTGATCTTTTTATATATTCCACTAATAATTTTAGTGGT
TTTCTCATTTAGTAATTCTGAAATTATTAACTTATGGGGTGGTTTTACTTTTGACTGGTATCATGAGGTTATTCATGATG
AAGATATCATAAATGCCACTTTTACTAGCCTTAAAATAGCTACTATAACCTCTGCAATAGCTACAATATTAGGTACTATA
ATTGCTTATGCTATGACTAGATTTAAATTCTTTAGATCTAGAAGTTTTTTATATGGTCTTGTAGCAACACCTCTTGTATT
ACCAGATATTATTCTAGGGGTTGCTTTACTATTGATGTTTTCAACCTTACAACATTTAATTGGCTGGTCACACGAGCGTG
GTACAACTACTGTTGTGATAGCTCATGTAACTATGTGTACTGCTTATGTAACGATAGTAATGCAATCACGTATAGCTAGT
GTAGATATATCTCTAGAAGAAGCTGCTCTGGACCTAGGAGCTGGCCCTATAGAAACATTCTTTAAAATAACTCTACCACA
ACTAATACCAGCACTAATTACTTCAGCACTACTTACATTTACATTATCTATTGATGATTTAGTTGTAACAGAATTTGTTG
CAGGTAGTGATAACCCTACTTTACCGATGTATATTTACTCAACTGTAAAAAATGGTCCTACGCCTGAGATAAACGCCTTG
GCTACAATCATGATTGGAATTATCGTCGGTGGTGTGCTATTAGGCATGTTTATCTCTGCTAAGTTCCAAAAAAGACAAAA
TGGTTAA

Upstream 100 bases:

>100_bases
GCTGCGATATCCGTAGTTTTAATAGTTATACTAGTTTTACCTATCCTATGGATGCAACGCATTCAAGCAAAGCGAACTTT
TGTTTAGGAGGATATGAGCG

Downstream 100 bases:

>100_bases
GATTAAAAGTTTGGTTTATATTCTAAAAGTTAAAAATAGCTTTTAAGTTTTCATTATAGTCAAATAAAAATACAGACGAA
TTTAATCAATCCTAGATATA

Product: ABC transporter, permease protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVIHDEDIINATFTSLKIATITSAIATILGTI
IAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLMFSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIAS
VDISLEEAALDLGAGPIETFFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINAL
ATIMIGIIVGGVLLGMFISAKFQKRQNG

Sequences:

>Translated_268_residues
MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVIHDEDIINATFTSLKIATITSAIATILGTI
IAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLMFSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIAS
VDISLEEAALDLGAGPIETFFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINAL
ATIMIGIIVGGVLLGMFISAKFQKRQNG
>Mature_268_residues
MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVIHDEDIINATFTSLKIATITSAIATILGTI
IAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLMFSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIAS
VDISLEEAALDLGAGPIETFFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINAL
ATIMIGIIVGGVLLGMFISAKFQKRQNG

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=266, Percent_Identity=45.1127819548872, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1787368, Length=220, Percent_Identity=37.2727272727273, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1787714, Length=245, Percent_Identity=32.2448979591837, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788764, Length=207, Percent_Identity=26.5700483091787, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29479; Mature: 29479

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVIHDEDIINAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHH
FTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIETF
HHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
FKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINAL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHH
ATIMIGIIVGGVLLGMFISAKFQKRQNG
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVIHDEDIINAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHH
FTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIETF
HHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
FKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINAL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHH
ATIMIGIIVGGVLLGMFISAKFQKRQNG
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]