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The map label for this gene is ygfZ [C]

Identifier: 134302296

GI number: 134302296

Start: 1305633

End: 1306379

Strand: Reverse

Name: ygfZ [C]

Synonym: FTW_1394

Alternate gene names: 134302296

Gene position: 1306379-1305633 (Counterclockwise)

Preceding gene: 134302300

Following gene: 134302295

Centisome position: 68.81

GC content: 31.06

Gene sequence:

>747_bases
ATGACTTTTCAATACACTAATTTTAAAATTTTAGAAGTAAGTGGTGTAGACACCAAAAAATTTTTGCAAGGGTTAACTAC
AGCAGATTTAAATGGATTATCAATTGATAATGATATTTTGTTGACAGCTTTTGCTAACTTAAAAGGACGAATTATTTCAC
TGTGTTTTGTTAAGTTTATATCCAATGAGAAACTACTCTTGTCAGTTGAGCAAGAGGTTTTTGAAAATCTACTAGCGTGG
TTGAAAAAGTACGGGATGTTCTCCAAAGTTTCTTTTAATCCTAATGATGATTATGCTTTGTTTTTCACAAAAACTGGCTT
TTTAAATCATGATATTTTGACTAAAGGTTCTTTAACTTCTGAAATGACTTTTGAGCAAGTTCAAAAAGAGAATATCATTA
ATAAACTTGCAACCATAAATGCGGCTAATTTTGAGAAGTTTCTTCCTGCTGAGTTGGATTTAGATAATGTTGATAAGGTG
GTTTGCTATACCAAAGGTTGCTATATGGGGCAAGAAGTTATAGCTAGGATGCATTACAAAGCTAAACTAAAAAAAGAACT
AGCAGTAGTTAAATCTGAGTCGGATATTGATGATTTTGATTTAAAGGATAGTGAAGGTAAACCTCTAGCTAATGTTGTTA
ATAAAGTATTTGTTGATAACCAGTGCTATATGCTAGTTGTGTTTCATAAAGAAGCTTCTGAGCAAGAGTATCAATTAGAT
GATGGCAAAATTATAACTAAATGCTAG

Upstream 100 bases:

>100_bases
AAATATAATAAAAACTATTATATAACTGAGATCCTTTGATAACTACAATCAAATACTATAAAATCTACTAGTTAGATTCT
TTACCAATAAAGGTTGTGCT

Downstream 100 bases:

>100_bases
ATAATCTTAATCAACAGCAGCAACAAGCTGTCAAGTATATAGCAACACCATTACTTGTATTAGCAGGTGCAGGTAGTGGT
AAAACTAGTGTAATTATAGA

Product: putative aminomethyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTFQYTNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKLLLSVEQEVFENLLAW
LKKYGMFSKVSFNPNDDYALFFTKTGFLNHDILTKGSLTSEMTFEQVQKENIINKLATINAANFEKFLPAELDLDNVDKV
VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDIDDFDLKDSEGKPLANVVNKVFVDNQCYMLVVFHKEASEQEYQLD
DGKIITKC

Sequences:

>Translated_248_residues
MTFQYTNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKLLLSVEQEVFENLLAW
LKKYGMFSKVSFNPNDDYALFFTKTGFLNHDILTKGSLTSEMTFEQVQKENIINKLATINAANFEKFLPAELDLDNVDKV
VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDIDDFDLKDSEGKPLANVVNKVFVDNQCYMLVVFHKEASEQEYQLD
DGKIITKC
>Mature_247_residues
TFQYTNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKLLLSVEQEVFENLLAWL
KKYGMFSKVSFNPNDDYALFFTKTGFLNHDILTKGSLTSEMTFEQVQKENIINKLATINAANFEKFLPAELDLDNVDKVV
CYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDIDDFDLKDSEGKPLANVVNKVFVDNQCYMLVVFHKEASEQEYQLDD
GKIITKC

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygfZ (UP14) and B.aphidicola (subsp. Acyrthosiphon pisum) BU435 [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 28217; Mature: 28086

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQYTNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFI
CCEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHH
SNEKLLLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALFFTKTGFLNHDILTKGSLTS
CCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCH
EMTFEQVQKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTKGCYMGQEVIARMHYK
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
AKLKKELAVVKSESDIDDFDLKDSEGKPLANVVNKVFVDNQCYMLVVFHKEASEQEYQLD
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEEEEECCCCCCCEECC
DGKIITKC
CCEEEECC
>Mature Secondary Structure 
TFQYTNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFI
CEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHH
SNEKLLLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALFFTKTGFLNHDILTKGSLTS
CCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCH
EMTFEQVQKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTKGCYMGQEVIARMHYK
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
AKLKKELAVVKSESDIDDFDLKDSEGKPLANVVNKVFVDNQCYMLVVFHKEASEQEYQLD
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEEEEECCCCCCCEECC
DGKIITKC
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]