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The map label for this gene is iscR [H]

Identifier: 134301877

GI number: 134301877

Start: 843220

End: 843630

Strand: Direct

Name: iscR [H]

Synonym: FTW_0872

Alternate gene names: 134301877

Gene position: 843220-843630 (Clockwise)

Preceding gene: 134301874

Following gene: 134301878

Centisome position: 44.42

GC content: 32.6

Gene sequence:

>411_bases
ATGCTTAAGATAAGTAAATTACTCGACTACGGTTTACTAGTAGTTGTTACAATAGCACAAAATGATTCTAATCCATATAG
TGCTGCTAAAATTGCTGAGTTTACGGGTCTAAATATCCCCACAGTAAGAAAACTACTAAACCAACTCTCTTTGGCAAATA
TTGTAACCTCAAAGCGAGGTATCGAAGGGGGCTACACACTAGTTAGCGATTCTAGAGATATAACAGTTTTAGATATTGTT
AAGTGTGTGGAAAAAGATGTAAATTTAACTGAATGTTGTGATTTGCAAAAAAAATGTAGTTTAGGAAATTGTATGGTAAG
TGGTTATTGGAAAGTTTTAAACAGTCAGCTACTTAGCTTACTATCAAAGACATCAATTTATGATATTGTCAACAACAAAG
ACAAGAGTTAA

Upstream 100 bases:

>100_bases
CTAAGGTGATAAAATAATCAAATTTTTAATTTACATTCAGCCTTATAATATATTATTATATAGGGATATGATACTAAATT
AGTATAGATTAAAGGTAATT

Downstream 100 bases:

>100_bases
AAGAAAATGAGTGAAAATTTAGATAAAATCATTGAGCAAGACTATGAGCATGGTTTTGTTACTAATATTGAAGCAGAAAC
AATTGAGGCTGGTCTTAATG

Product: rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLKISKLLDYGLLVVVTIAQNDSNPYSAAKIAEFTGLNIPTVRKLLNQLSLANIVTSKRGIEGGYTLVSDSRDITVLDIV
KCVEKDVNLTECCDLQKKCSLGNCMVSGYWKVLNSQLLSLLSKTSIYDIVNNKDKS

Sequences:

>Translated_136_residues
MLKISKLLDYGLLVVVTIAQNDSNPYSAAKIAEFTGLNIPTVRKLLNQLSLANIVTSKRGIEGGYTLVSDSRDITVLDIV
KCVEKDVNLTECCDLQKKCSLGNCMVSGYWKVLNSQLLSLLSKTSIYDIVNNKDKS
>Mature_136_residues
MLKISKLLDYGLLVVVTIAQNDSNPYSAAKIAEFTGLNIPTVRKLLNQLSLANIVTSKRGIEGGYTLVSDSRDITVLDIV
KCVEKDVNLTECCDLQKKCSLGNCMVSGYWKVLNSQLLSLLSKTSIYDIVNNKDKS

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=126, Percent_Identity=26.1904761904762, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14947; Mature: 14947

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKISKLLDYGLLVVVTIAQNDSNPYSAAKIAEFTGLNIPTVRKLLNQLSLANIVTSKRG
CCCHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
IEGGYTLVSDSRDITVLDIVKCVEKDVNLTECCDLQKKCSLGNCMVSGYWKVLNSQLLSL
CCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHH
LSKTSIYDIVNNKDKS
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKISKLLDYGLLVVVTIAQNDSNPYSAAKIAEFTGLNIPTVRKLLNQLSLANIVTSKRG
CCCHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
IEGGYTLVSDSRDITVLDIVKCVEKDVNLTECCDLQKKCSLGNCMVSGYWKVLNSQLLSL
CCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHH
LSKTSIYDIVNNKDKS
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]