Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 134301878

GI number: 134301878

Start: 843637

End: 845082

Strand: Direct

Name: sufB [C]

Synonym: FTW_0873

Alternate gene names: 134301878

Gene position: 843637-845082 (Clockwise)

Preceding gene: 134301877

Following gene: 134301879

Centisome position: 44.44

GC content: 36.38

Gene sequence:

>1446_bases
ATGAGTGAAAATTTAGATAAAATCATTGAGCAAGACTATGAGCATGGTTTTGTTACTAATATTGAAGCAGAAACAATTGA
GGCTGGTCTTAATGAAGATGTAATCCGTTTGATATCTGCAAGAAAAAACGAACTTGAGTTTTTATTGGAATGGCGCCTCA
AAGCTTATCACAAATGGCTAGAGATGAAGTCACCTAAATGGGCAGATTTAAATTATCCTCCTATAGATTTTCAAGCTATT
AGTTATTACTCATCACCCAAGTCACTTAAAAATCATCCAAAAAGCTTAGATGAAGTTGATCCAGAGATCATTGAGACTTA
CAACAAGCTTGGTATTCCTTTACATGAGCAAGAAATGTTAGCGGGCGTCAGAAATATTGCTGTAGATGCGGTATTTGACT
CAGTGTCTGTTGTAACAACATTCAAAGAAAAATTAGCAGAAGCTGGAGTAATATTTTGCCCAATATCAGAAGCTGTACAA
AAATACCCTGAACTTGTACAGAAATATCTGGGATCAGTAGTTCCTCAAGGAGACAATTTCTTTGCTGCGCTTAATTCAGC
AGTATTTAGTGACGGGTCATTCGTGTATATCCCTAAAGGTGTAACTTGCCCAATGGAATTATCAACGTACTTTAGAATCA
ATGCTATGAACACAGGGCAGTTTGAGAGAACTTTGATTATAGCAGATGAGGGTAGTTATGTAAGCTACTTAGAAGGTTGT
ACTGCACCAATGCGTGATGAAAACCAACTTCATGCTGCAGTTGTTGAGTTAGTGGCACTAGATGGTGCTGAGATTAAATA
CTCGACAGTACAAAACTGGTACCCAGGTGATAAAGATGGCAAAGGTGGAATTTATAATTTTGTAACTAAAAGAGGGGTCT
GTCATAAAAATGCAAAAATTTCATGGACACAAGTTGAAACAGGTTCAGCTATTACATGGAAATATCCTTCTGTAGTTTTG
CGTGGTGATAACTCAATTGGTGAATTCTATTCAGTAGCATTAACTCGCCATGCTCAGCAAGCTGATACAGGTACAAAAAT
GATTCATCTTGGTAAAAACACCAAAAGTACAATCATTTCAAAAGGTATATCTGCAGGTAAAGCATCACAAGCATACAGAG
GTTTAGTAAGGATTTCTCCAAATGCTGCTAATGCAAGAAATTTTTCACAATGTGACTCTTTATTAATTGGTCATAATTGT
GGAGCACATACTTATCCATATATAGAAAACAAAAGTAACTCCTCACAGATAGAGCATGAAGCTACAATCTCTAAGATTTC
TGATGATCAACTCTTTTATTGTAAGCAAAGAGGTTTATCAGAAGAAGATGCGATCGCTATGATTGTAAATGGCTTCTGTA
AAGAGGTATTTAAAAAACTTCCACTTGAGTTTGCTGTTGAAGCTCAGAAGCTTATGGAAGTCAGTCTAGAAGGTGCAGTT
GGTTAA

Upstream 100 bases:

>100_bases
AAGTGGTTATTGGAAAGTTTTAAACAGTCAGCTACTTAGCTTACTATCAAAGACATCAATTTATGATATTGTCAACAACA
AAGACAAGAGTTAAAAGAAA

Downstream 100 bases:

>100_bases
GCTATAAATTATATAATTTGATAAAAAAGGTTTAAAAAATGTTGTTAGAAATTAAAGATTTACATGTAAGTGTTGGTGAA
CAAAAAAAACAAATACTAAA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEMKSPKWADLNYPPIDFQAI
SYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAGVRNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQ
KYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC
TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL
RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNC
GAHTYPYIENKSNSSQIEHEATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGAV
G

Sequences:

>Translated_481_residues
MSENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEMKSPKWADLNYPPIDFQAI
SYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAGVRNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQ
KYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC
TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL
RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNC
GAHTYPYIENKSNSSQIEHEATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGAV
G
>Mature_480_residues
SENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEMKSPKWADLNYPPIDFQAIS
YYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAGVRNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQK
YPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCT
APMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVLR
GDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCG
AHTYPYIENKSNSSQIEHEATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGAVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=483, Percent_Identity=62.3188405797101, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=28.1045751633987, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53499; Mature: 53368

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWL
CCCHHHHHHHHHHCCCCEECCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EMKSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEML
HCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCHHHCCHHHHHHHHHHCCCCCHHHHH
AGVRNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCH
FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHCC
TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKI
CCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEE
SWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIIS
EEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
KGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHE
HCCCCCCHHHHHCCEEEECCCCCCCCCHHHHHHEEEECCCCCCCCCCEECCCCCCHHHHH
ATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGAV
HHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure 
SENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWL
CCHHHHHHHHHHCCCCEECCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EMKSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEML
HCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCHHHCCHHHHHHHHHHCCCCCHHHHH
AGVRNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCH
FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHCC
TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKI
CCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEE
SWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIIS
EEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
KGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHE
HCCCCCCHHHHHCCEEEECCCCCCCCCHHHHHHEEEECCCCCCCCCCEECCCCCCHHHHH
ATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGAV
HHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]