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The map label for this gene is ycfF [C]

Identifier: 134301780

GI number: 134301780

Start: 723695

End: 724033

Strand: Reverse

Name: ycfF [C]

Synonym: FTW_0748

Alternate gene names: 134301780

Gene position: 724033-723695 (Counterclockwise)

Preceding gene: 134301781

Following gene: 134301778

Centisome position: 38.14

GC content: 32.45

Gene sequence:

>339_bases
ATGTCAGATTGTATTTTTTGCAAGATTATCACAGGCGAAATTCCATCTAAAAAAGTGTATGAAGATGAAAATATTTTTGC
TTTTCATGATATCAATCCAGCAGCTGATGTACATATCCTTGTTATACCTAAAAAACATATTGCTAGCTTAAACGATCTAA
CTGAGCAAGATCAAGAGCTTATGGGAAAATTTATACTTAGTATTCCTAAAGTTGCTAAGCTAATGGGATTAAAAGGTTTT
AAGACTATTTTTAATACTGGTAAAGAAGGTGGGCAGATGGTTTTTCATCTCCATGCGCATATTTTAGGTGGTAAAATCAG
ATCTAAGCTTCCTGAGTAA

Upstream 100 bases:

>100_bases
TTAAACTACAAAACTTTATTAGTAATTATAGTACTAGTTTTATAATTGTTGGAGTTGCATGCTTGATTTACTATAGTTTT
AAAAAGGAGAAATAAACATT

Downstream 100 bases:

>100_bases
TTACTTTAAATTTAAACTAGCTTGCCAAGCTTAAAACCGGAGGTGGAAAAGAACTATTTGAAAAGCTATTTATCTGATGT
AGTCCTTGTGCAAAACTCAT

Product: histidine triad (HIT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSDCIFCKIITGEIPSKKVYEDENIFAFHDINPAADVHILVIPKKHIASLNDLTEQDQELMGKFILSIPKVAKLMGLKGF
KTIFNTGKEGGQMVFHLHAHILGGKIRSKLPE

Sequences:

>Translated_112_residues
MSDCIFCKIITGEIPSKKVYEDENIFAFHDINPAADVHILVIPKKHIASLNDLTEQDQELMGKFILSIPKVAKLMGLKGF
KTIFNTGKEGGQMVFHLHAHILGGKIRSKLPE
>Mature_111_residues
SDCIFCKIITGEIPSKKVYEDENIFAFHDINPAADVHILVIPKKHIASLNDLTEQDQELMGKFILSIPKVAKLMGLKGFK
TIFNTGKEGGQMVFHLHAHILGGKIRSKLPE

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=46.6666666666667, Blast_Score=104, Evalue=2e-23,
Organism=Homo sapiens, GI14211923, Length=105, Percent_Identity=41.9047619047619, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=42.8571428571429, Blast_Score=87, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=46.6666666666667, Blast_Score=110, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320078, Length=99, Percent_Identity=41.4141414141414, Blast_Score=74, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28574010, Length=104, Percent_Identity=48.0769230769231, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24581222, Length=104, Percent_Identity=48.0769230769231, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12500; Mature: 12369

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCIFCKIITGEIPSKKVYEDENIFAFHDINPAADVHILVIPKKHIASLNDLTEQDQEL
CCCEEEEEEEECCCCCCCEECCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
MGKFILSIPKVAKLMGLKGFKTIFNTGKEGGQMVFHLHAHILGGKIRSKLPE
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHCCHHHHCCCC
>Mature Secondary Structure 
SDCIFCKIITGEIPSKKVYEDENIFAFHDINPAADVHILVIPKKHIASLNDLTEQDQEL
CCEEEEEEEECCCCCCCEECCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
MGKFILSIPKVAKLMGLKGFKTIFNTGKEGGQMVFHLHAHILGGKIRSKLPE
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]