| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is thrS [H]
Identifier: 134301672
GI number: 134301672
Start: 606122
End: 608026
Strand: Direct
Name: thrS [H]
Synonym: FTW_0612
Alternate gene names: 134301672
Gene position: 606122-608026 (Clockwise)
Preceding gene: 134301670
Following gene: 134301673
Centisome position: 31.93
GC content: 36.33
Gene sequence:
>1905_bases ATGATAAATATCAGATTTCCAGATGGTTCGATAAGAGAATTTGAAGCCGGTGTTAATTCTCTAGATGTTGCTAAATCAAT ATCTCCAAGCTTAGCTAAAGCTACAATGGCTGCGTATATTGATGACCAGCTCAAAGATGCAAAAGATGCGATTAACAGTA ACTGTGAATTAAGATTGATAACAGTAAAAGATCCAGAGGGTCTCGAAATTCTAAGACATTCTTGCGCTCATCTTTTAGCT CATGCTGTCAAAGAGTTGTATCCAAATACTGAAGTAACTATAGGTCCGGTAGTTGATAATGGCTTTTATTATGATTTTTC TTTCAAAGAGTCTATAGGTGAAGCAGATTTACCTACTATCGAAAAGAAAATGAAAGAATTAGCAAAAAAGTCTGCACCTG TTAGTTATAGAGTGGTTCCTAAAGCTGAAGCAATTGAGTTTTTTAAGGCTCAAGGTGAGAACTATAAGGTTGAGATTATT GATAGCATTGCTGATGAGCAGATGAAAATATATACCCAAGATAATTTTAGTGACTTGTGTAGAGGTCCTCATATTCCAAA TACATCAGTATTAAAAGCATTTAAGTTGACAAAACTAGCAGGAGCTTATTGGCGAGGTAACTCTGATAATGAAATGCTAA CTAGAATCTATGGCACATGCTGGGCAACTAAAGAAGATTTAGAGCAATATTTGAATATGCTTGAAGAGGCTGAAAAGCGT GATCATAGAAAAATTGGTAAAGTTCTTGATCTATTTCATTTTCAAGAAGACTCACCAGGCATAGCTTTTTGGCATGATAA TGGTGTGAGAATATGGCGTCAAGTAGAAGATTATATGCGAGCTTCTAATAATAAATATGGCTGTAGTGAGATTAGAACCC CACTTATTGCAGATTTTAGTTTGTGGCAAAAATCTGGTCACGCATCTAAGTATGCTGAGAATATGTTTGCAACAAAGTCT GAGAACAGGGATTTTGCTATCAGACCAATGAACTGTCCAACTTGTGTACAGGTTTATAATACAAAGCTACATAGTTATAG AGATCTACCTATAAGGATGGCTGAGTTCGGTATAGTACATAGGAATGAACCATCTGGATCGCTACACGGGTTATTAAGAG TACGTAGCTTTACTCAAGATGATGGGCATATTTTCTGTACCCCTGAGCAGGTTGAAGAAGAAGTGATTTTGATGGTACAG CAGTGTTTTGAAGTATACAAAGATTTTGGTTTTAATGATTTTGCGATCAAGATTGCACTTAGACCTGAAAATAGAATCGG AGATGATGAAACTTGGGATAAATCTGAACAGATGCTCAAAAATGCTCTTGACGCTAATAATGTTAGTTATGAACTACTTC CAGGTGAGGGTGCATTTTATGGTCCTAAGATTGAGTTTCATCTCAAAGATGCAATTGGTAGAAGCTGGCAGTGTGGCACT ATACAACTAGATTTTTCAATGCCACAAAGGCTAGGAGCTACATATATTGACAAGAATGGCGAGAAACAGGTGCCAGTTAT GCTTCACAGAGCTATCGTTGGTTCTTTGGAGAGATTTATAGGTATGCTTATTGAGCATTATGCTGGAAATTTACCATTGT GGTTAGCTCCAGTCCAAGTTGCTGTGATGGGAATTAGTAATAATCAGGATGACTACTGTAAAGAAGTATTTATAATGCTT GAAAAAAATGGTATCCGAGCTAAATTAGACTTGAGAAATGAGAAAATAGGGTTTAAAATACGTGAGCATACTCTTTTGCG TGTACCATACCTTGTTATCCTTGGTAAAAACGAGCAAGAGCAAAAGATTATCACAATAAGAAAGCATAGCGGCGAAGATC TAGGACAGATGTCTGTAGATGATTTTTGTGCTTTTTTAGATAAGCAAATACAGGCTAAAGAATAA
Upstream 100 bases:
>100_bases TTAAGTTTATTGATAAATAATTTACATAATTATAGCCATACAATATAATATATACTCTATGTAATATTTCATTAACAATA TAATAGATTAAGTACTGCAA
Downstream 100 bases:
>100_bases TAATTTCTGCGGAGGAAAAAGATTATTAAAACGGATAAAAAAGCACCTATAAATGAGCAAATTAAAGCAAAAGAGGTGCG TCTAGTTGGTGTTGATGGTC
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLITVKDPEGLEILRHSCAHLLA HAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEII DSIADEQMKIYTQDNFSDLCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEKR DHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAENMFATKS ENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQ QCFEVYKDFGFNDFAIKIALRPENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKDAIGRSWQCGT IQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIML EKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQIQAKE
Sequences:
>Translated_634_residues MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLITVKDPEGLEILRHSCAHLLA HAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEII DSIADEQMKIYTQDNFSDLCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEKR DHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAENMFATKS ENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQ QCFEVYKDFGFNDFAIKIALRPENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKDAIGRSWQCGT IQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIML EKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQIQAKE >Mature_634_residues MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLITVKDPEGLEILRHSCAHLLA HAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEII DSIADEQMKIYTQDNFSDLCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEKR DHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAENMFATKS ENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQ QCFEVYKDFGFNDFAIKIALRPENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKDAIGRSWQCGT IQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIML EKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQIQAKE
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=624, Percent_Identity=37.1794871794872, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI38202255, Length=625, Percent_Identity=36.64, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI20070344, Length=642, Percent_Identity=34.5794392523364, Blast_Score=395, Evalue=1e-110, Organism=Escherichia coli, GI1788013, Length=635, Percent_Identity=52.9133858267717, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=161, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984184, Length=628, Percent_Identity=36.7834394904459, Blast_Score=446, Evalue=1e-125, Organism=Caenorhabditis elegans, GI71984192, Length=628, Percent_Identity=36.7834394904459, Blast_Score=446, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322112, Length=627, Percent_Identity=36.5231259968102, Blast_Score=427, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322654, Length=389, Percent_Identity=37.0179948586118, Blast_Score=271, Evalue=2e-73, Organism=Drosophila melanogaster, GI24583842, Length=631, Percent_Identity=36.7670364500792, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI28574141, Length=631, Percent_Identity=36.7670364500792, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI24583839, Length=631, Percent_Identity=36.7670364500792, Blast_Score=455, Evalue=1e-128,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 72390; Mature: 72390
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI CEEEECCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEHHHCCCCCCCHHH EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSDLC HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEECCCHHHHH RGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEKR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFS HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH LWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVH HHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHCCEEE RNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAIKIAL CCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE RPENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKDAIGRSWQCGT CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEECCEEEEEEHHHCCCCCCCCE IQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQV EEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEE AVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQE EEEECCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCEEEECCEEEECCEEEEECCCCCC QKIITIRKHSGEDLGQMSVDDFCAFLDKQIQAKE CEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI CEEEECCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEHHHCCCCCCCHHH EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSDLC HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEECCCHHHHH RGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEKR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFS HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH LWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVH HHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHCCEEE RNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAIKIAL CCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE RPENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKDAIGRSWQCGT CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEECCEEEEEEHHHCCCCCCCCE IQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQV EEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEE AVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQE EEEECCCCCHHHHHHHHHEEECCCCEEEEECCCCCCCEEEECCEEEECCEEEEECCCCCC QKIITIRKHSGEDLGQMSVDDFCAFLDKQIQAKE CEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA