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The map label for this gene is kdsD [H]

Identifier: 134301645

GI number: 134301645

Start: 576918

End: 577889

Strand: Reverse

Name: kdsD [H]

Synonym: FTW_0585

Alternate gene names: 134301645

Gene position: 577889-576918 (Counterclockwise)

Preceding gene: 134301658

Following gene: 134301638

Centisome position: 30.44

GC content: 34.26

Gene sequence:

>972_bases
ATGACCAGCCATATTAACAATGCTATTGAAACATTTCGCTTAGAGATAGAAACGTTAGAAAAATTAAAAAATTCTATAGA
TGAGAATTTCGAAAAAGCATGTGAGATTATTCTAGAAAATAATCGTGATAAAAGTCGAGTAATAATAACCGGTATGGGAA
AATCTGGTCATATCGGTAAAAAAATGGCTGCAACATTCGCTAGTACTGGGACGCCTGCTTTTTTTGTACACCCAGGTGAG
GCTGGACACGGTGATTTTGGCATGATTACTAAAAATGATGTATTAATAGCTATTTCAAACTCTGGGACATCATCTGAGAT
CATGGGATTACTGCCAATGATAAAACACCTTGATATTCCAATAATTGCTATTACTAGTAATCCAAAATCAATACTTGCTA
GAAATAGTAATGTCACTCTTAATCTACATGTTGACAAAGAAGCATGCCCGCTAAATCTTGCCCCGACATCAAGCACTACA
GCAACTTTAGTTTTAGGAGACGCTTTGGCAATTGCATTACTTAAGGCAAAAAACTTCTCTGAAAAAGATTTTGCTTTTTC
ACACCCTAATGGTGCCCTAGGTAGAAAACTAATTTTAAAAGTTGAAAATATAATGCGTAAAGGTAATGAGATACCAATAG
TTAAACCAACCGATAATATCCGTAAAGCAATATTAGAAATCAGCGATAAAGGTGTTGGAAATACCTTAGTCGCTGAAAAT
AATACGCTTTTAGGTATTTTTACTGATGGTGACCTAAGAAGAATGTTTGAAGCAGAGAGTTTCAATTCTCAGCGAGCTAT
CTCAGAAGTAATGACAAAAAACCCTAAAAGTATCTCAAAAGAAGAAATGGCAATAACAGCTCTTGAAAAAATGGAAAAAT
ATGAAATCACAAGTCTAGCAGTAGTCGACAATGGCCATAATATACTAGGTATAGTAACAATGCATGATCTTATCAAACTT
GAACTTAGATAA

Upstream 100 bases:

>100_bases
CTATCATATTGAAAGTAAAATTTGGTTATATAAAATATAAATTTGTGTCTATAAACCTTAGTTTAAAAGATTTATTACTT
ATTAGTTTTTGGAGATTAGC

Downstream 100 bases:

>100_bases
CTTCTATAACTGTTTTATAAAAATCTTTTTCAACCAATGGTCAACACTTACATATCTTCCACCACCGTATAAGAATAATG
TAAATAACATAATGAAATAT

Product: KpsF/GutQ family sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTSHINNAIETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTGTPAFFVHPGE
AGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTT
ATLVLGDALAIALLKAKNFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAEN
NTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIVTMHDLIKL
ELR

Sequences:

>Translated_323_residues
MTSHINNAIETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTGTPAFFVHPGE
AGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTT
ATLVLGDALAIALLKAKNFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAEN
NTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIVTMHDLIKL
ELR
>Mature_322_residues
TSHINNAIETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTGTPAFFVHPGEA
GHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTA
TLVLGDALAIALLKAKNFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAENN
TLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIVTMHDLIKLE
LR

Specific function: Catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate [H]

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=311, Percent_Identity=54.3408360128617, Blast_Score=340, Evalue=6e-95,
Organism=Escherichia coli, GI87082151, Length=316, Percent_Identity=41.7721518987342, Blast_Score=254, Evalue=7e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: =5.3.1.13 [H]

Molecular weight: Translated: 35245; Mature: 35114

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHINNAIETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH
KMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIP
HHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCC
IIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFS
EEEEECCCHHHEEECCCEEEEEEECCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHCCCC
EKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAEN
CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECC
NTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLA
CEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEEE
VVDNGHNILGIVTMHDLIKLELR
EEECCCCEEEEEEEEEEEEEECC
>Mature Secondary Structure 
TSHINNAIETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH
KMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIP
HHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCC
IIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFS
EEEEECCCHHHEEECCCEEEEEEECCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHCCCC
EKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAEN
CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECC
NTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLA
CEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEEE
VVDNGHNILGIVTMHDLIKLELR
EEECCCCEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]