Click here to switch to the map view.

The map label for this gene is ygdH [C]

Identifier: 134301638

GI number: 134301638

Start: 571578

End: 572291

Strand: Reverse

Name: ygdH [C]

Synonym: FTW_0578

Alternate gene names: 134301638

Gene position: 572291-571578 (Counterclockwise)

Preceding gene: 134301645

Following gene: 134301637

Centisome position: 30.14

GC content: 36.69

Gene sequence:

>714_bases
ATGCTATGGAAAGAAAGAAAGATAGTATCAGCACCATCTAGCGATATGGGCTTTGATAAAGCTAAAGCAAGTTGGGATAT
TATGAAAATATCATTAGAGCTTGTTGAGGGCTATGAAAGGCTAGGCAAGATTGCTCCTGCTATTAGCATATTTGGCTCTG
CGAGAATTTCAAAAGATGACAGATACTATAAAGATACTGTAGAACTGGCTAAATCATTGTCAGATCATGGTTTTGCTGTA
ATCACAGGTGGTGGTCCAGGTATTATGGAAGCTGGCAATAAGGGTGCCCAACAAGGCTCATGCTCTAGTATAGGTCTAAA
TATCACCCTACCACATGAGCAACGCCCAAATCAATATCAAGATATCTTCTTAATTTATAGATATTTCTTTACACGCAAAG
CAATGTTTATTAAGCACTCGATGTCTTATATCGTCATGCCAGGCGGTTTTGGTACATTAGATGAGCTCTTTGATATTACC
ACTCTTATTCAAACTGGTAAAAAAGTCAAAATGCCAATTATATTATATGGTAAAGACTTTTGGGGTGGCTTGATGGAATG
GATCAAAACAACATTAGTAGGCAAAGGTGTAATAAGCGAAGAAGAAGTAAACCTACTAACTCTTGTTGACAGCATTGACG
AAACAATAGAAATAATTGCTGAGCACTATATGAGTACATATAGCTCAAAAGCACACGCAAAAATTGTATTTTAA

Upstream 100 bases:

>100_bases
ATTATTTAAATCAACACTCTCTAGTATTAGCAACCTAAACTAATATATAATTATAGTTAATCAAAAAATAAAACACTAGT
TTAATTTTAGGTGATTTCGT

Downstream 100 bases:

>100_bases
AGGTTCTAGTCATATGGATATCAATACTATTTCAGCAACATTGATAAACAACTCACTACCTATAATCGCAGCTTTTAATC
TTTTGATTCATATTTTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLWKERKIVSAPSSDMGFDKAKASWDIMKISLELVEGYERLGKIAPAISIFGSARISKDDRYYKDTVELAKSLSDHGFAV
ITGGGPGIMEAGNKGAQQGSCSSIGLNITLPHEQRPNQYQDIFLIYRYFFTRKAMFIKHSMSYIVMPGGFGTLDELFDIT
TLIQTGKKVKMPIILYGKDFWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHYMSTYSSKAHAKIVF

Sequences:

>Translated_237_residues
MLWKERKIVSAPSSDMGFDKAKASWDIMKISLELVEGYERLGKIAPAISIFGSARISKDDRYYKDTVELAKSLSDHGFAV
ITGGGPGIMEAGNKGAQQGSCSSIGLNITLPHEQRPNQYQDIFLIYRYFFTRKAMFIKHSMSYIVMPGGFGTLDELFDIT
TLIQTGKKVKMPIILYGKDFWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHYMSTYSSKAHAKIVF
>Mature_237_residues
MLWKERKIVSAPSSDMGFDKAKASWDIMKISLELVEGYERLGKIAPAISIFGSARISKDDRYYKDTVELAKSLSDHGFAV
ITGGGPGIMEAGNKGAQQGSCSSIGLNITLPHEQRPNQYQDIFLIYRYFFTRKAMFIKHSMSYIVMPGGFGTLDELFDIT
TLIQTGKKVKMPIILYGKDFWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHYMSTYSSKAHAKIVF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26485; Mature: 26485

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWKERKIVSAPSSDMGFDKAKASWDIMKISLELVEGYERLGKIAPAISIFGSARISKDD
CCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RYYKDTVELAKSLSDHGFAVITGGGPGIMEAGNKGAQQGSCSSIGLNITLPHEQRPNQYQ
HHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHH
DIFLIYRYFFTRKAMFIKHSMSYIVMPGGFGTLDELFDITTLIQTGKKVKMPIILYGKDF
HHHHHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCEEEECCHH
WGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHYMSTYSSKAHAKIVF
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MLWKERKIVSAPSSDMGFDKAKASWDIMKISLELVEGYERLGKIAPAISIFGSARISKDD
CCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RYYKDTVELAKSLSDHGFAVITGGGPGIMEAGNKGAQQGSCSSIGLNITLPHEQRPNQYQ
HHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHH
DIFLIYRYFFTRKAMFIKHSMSYIVMPGGFGTLDELFDITTLIQTGKKVKMPIILYGKDF
HHHHHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCEEEECCHH
WGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHYMSTYSSKAHAKIVF
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA